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Cluster: B11.bin_2_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_403 466380 469976 + 4.C.1.1.4
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_404 470147 471526 + FAD-depend_C
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_405 472019 473242 + DUF401
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_406 473438 473938 + 2.A.88.9.1
NULL(UNKNOWN) B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_407 474225 474824 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_408 474934 475626 - Lactamase_B | Lactamase_B_2
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_409 475658 476479 - 3.A.1.1.7
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_410 476495 477391 - 3.A.1.1.32
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_411 477521 478900 - 3.A.1.1.3
TF B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_412 479190 481547 + LacI
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_413 481712 482485 + GT51
Gene ID: B11_scaffold_167_corr_3_np12_403
Type: TC
Location: 466380 - 469976 (+)
Gene ID: B11_scaffold_167_corr_3_np12_404
Type: pfam
Location: 470147 - 471526 (+)
Gene ID: B11_scaffold_167_corr_3_np12_405
Type: pfam
Location: 472019 - 473242 (+)
Gene ID: B11_scaffold_167_corr_3_np12_406
Type: TC
Location: 473438 - 473938 (+)
Gene ID: B11_scaffold_167_corr_3_np12_407
Type:
Location: 474225 - 474824 (+)
Gene ID: B11_scaffold_167_corr_3_np12_408
Type: pfam
Location: 474934 - 475626 (-)
Gene ID: B11_scaffold_167_corr_3_np12_409
Type: TC
Location: 475658 - 476479 (-)
Gene ID: B11_scaffold_167_corr_3_np12_410
Type: TC
Location: 476495 - 477391 (-)
Gene ID: B11_scaffold_167_corr_3_np12_411
Type: TC
Location: 477521 - 478900 (-)
Gene ID: B11_scaffold_167_corr_3_np12_412
Type: TF
Location: 479190 - 481547 (+)
Gene ID: B11_scaffold_167_corr_3_np12_413
Type: CAZyme
Location: 481712 - 482485 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B11_scaffold_167_corr_3_np12_408 vegan > omnivore 1.00442 0.04329

🧭 Explore Read Mapping of CGC

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