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Cluster: B11.bin_2_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B11_contig_233 B11_contig_233_110 114462 115583 - 2.A.45.2.6
TF B11_contig_233 B11_contig_233_111 115745 116500 + HTH_6
TC B11_contig_233 B11_contig_233_112 116691 118289 + 4.A.1.1.3
CAZyme B11_contig_233 B11_contig_233_113 118309 119643 + GH4
TC B11_contig_233 B11_contig_233_114 119657 120139 + 4.A.1.1.13
TC B11_contig_233 B11_contig_233_115 120234 122489 - 5.A.3.3.2
TC B11_contig_233 B11_contig_233_116 122733 123674 + 3.A.1.24.5
TC B11_contig_233 B11_contig_233_117 123962 124936 + 3.A.1.24.2
TC B11_contig_233 B11_contig_233_118 124929 125564 + 3.A.1.24.5
NULL(UNKNOWN) B11_contig_233 B11_contig_233_119 125561 125812 + NULL(UNKNOWN)
[View Structural Homologs]
TC B11_contig_233 B11_contig_233_120 125805 128180 - 9.A.8.1.6
TC B11_contig_233 B11_contig_233_121 128308 129843 - 2.A.21.2.5
Gene ID: B11_contig_233_110
Type: TC
Location: 114462 - 115583 (-)
Gene ID: B11_contig_233_111
Type: TF
Location: 115745 - 116500 (+)
Gene ID: B11_contig_233_112
Type: TC
Location: 116691 - 118289 (+)
Gene ID: B11_contig_233_113
Type: CAZyme
Location: 118309 - 119643 (+)
Gene ID: B11_contig_233_114
Type: TC
Location: 119657 - 120139 (+)
Gene ID: B11_contig_233_115
Type: TC
Location: 120234 - 122489 (-)
Gene ID: B11_contig_233_116
Type: TC
Location: 122733 - 123674 (+)
Gene ID: B11_contig_233_117
Type: TC
Location: 123962 - 124936 (+)
Gene ID: B11_contig_233_118
Type: TC
Location: 124929 - 125564 (+)
Gene ID: B11_contig_233_119
Type:
Location: 125561 - 125812 (+)
Gene ID: B11_contig_233_120
Type: TC
Location: 125805 - 128180 (-)
Gene ID: B11_contig_233_121
Type: TC
Location: 128308 - 129843 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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