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Cluster: B11.bin_2_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_106 110313 111488 - 2.A.1.65.8
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_107 111636 114287 - 3.A.3.2.21
peptidase B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_108 114422 115573 - M20.UPW
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_109 115575 117653 - GH13_11
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_110 117746 119605 - 3.A.1.120.6
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_111 119678 120436 - Exo_endo_phos
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_112 120565 121050 - LuxS
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_113 121380 123077 - 3.A.1.121.4
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_114 123236 123910 - 9.B.20.1.4
NULL(UNKNOWN) B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_115 124189 124839 + NULL(UNKNOWN)
[View Structural Homologs]
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_116 125531 126295 - 3.A.1.3.14
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_117 126336 126995 - 3.A.1.3.13
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_118 127342 128214 - 3.A.1.3.27
Gene ID: B11_scaffold_167_corr_3_np12_106
Type: TC
Location: 110313 - 111488 (-)
Gene ID: B11_scaffold_167_corr_3_np12_107
Type: TC
Location: 111636 - 114287 (-)
Gene ID: B11_scaffold_167_corr_3_np12_108
Type: peptidase
Location: 114422 - 115573 (-)
Gene ID: B11_scaffold_167_corr_3_np12_109
Type: CAZyme
Location: 115575 - 117653 (-)
Gene ID: B11_scaffold_167_corr_3_np12_110
Type: TC
Location: 117746 - 119605 (-)
Gene ID: B11_scaffold_167_corr_3_np12_111
Type: pfam
Location: 119678 - 120436 (-)
Gene ID: B11_scaffold_167_corr_3_np12_112
Type: pfam
Location: 120565 - 121050 (-)
Gene ID: B11_scaffold_167_corr_3_np12_113
Type: TC
Location: 121380 - 123077 (-)
Gene ID: B11_scaffold_167_corr_3_np12_114
Type: TC
Location: 123236 - 123910 (-)
Gene ID: B11_scaffold_167_corr_3_np12_115
Type:
Location: 124189 - 124839 (+)
Gene ID: B11_scaffold_167_corr_3_np12_116
Type: TC
Location: 125531 - 126295 (-)
Gene ID: B11_scaffold_167_corr_3_np12_117
Type: TC
Location: 126336 - 126995 (-)
Gene ID: B11_scaffold_167_corr_3_np12_118
Type: TC
Location: 127342 - 128214 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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