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Cluster: B11.bin_2_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_84 84647 85969 - CE4
STP B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_85 85982 86512 - HD
NULL(UNKNOWN) B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_86 86864 88078 + NULL(UNKNOWN)
[View Structural Homologs]
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_87 88165 89181 - 2.A.56.1.5
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_88 89234 89674 - YcxB
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_89 90091 91386 - 2.A.56.1.5
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_90 91388 91909 - DctQ
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_91 92001 93116 - 2.A.56.1.1
TF B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_92 93267 94073 - HTH_AraC | HTH_AraC
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_93 94048 95514 - 8.A.59.2.1
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_94 95793 98525 - CBM48 | GH13_9
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_95 98565 99029 - MGS
sulfatase B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_96 99094 99990 - S1_56
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_97 100281 101228 - 8.A.5.1.4
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_98 101308 102162 - F_bP_aldolase
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_99 102190 103137 - 8.A.5.1.4
TF B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_100 103242 104504 - MarR
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_101 104854 106299 - 2.A.2.3.3
Gene ID: B11_scaffold_167_corr_3_np12_84
Type: CAZyme
Location: 84647 - 85969 (-)
Gene ID: B11_scaffold_167_corr_3_np12_85
Type: STP
Location: 85982 - 86512 (-)
Gene ID: B11_scaffold_167_corr_3_np12_86
Type:
Location: 86864 - 88078 (+)
Gene ID: B11_scaffold_167_corr_3_np12_87
Type: TC
Location: 88165 - 89181 (-)
Gene ID: B11_scaffold_167_corr_3_np12_88
Type: pfam
Location: 89234 - 89674 (-)
Gene ID: B11_scaffold_167_corr_3_np12_89
Type: TC
Location: 90091 - 91386 (-)
Gene ID: B11_scaffold_167_corr_3_np12_90
Type: pfam
Location: 91388 - 91909 (-)
Gene ID: B11_scaffold_167_corr_3_np12_91
Type: TC
Location: 92001 - 93116 (-)
Gene ID: B11_scaffold_167_corr_3_np12_92
Type: TF
Location: 93267 - 94073 (-)
Gene ID: B11_scaffold_167_corr_3_np12_93
Type: TC
Location: 94048 - 95514 (-)
Gene ID: B11_scaffold_167_corr_3_np12_94
Type: CAZyme
Location: 95793 - 98525 (-)
Gene ID: B11_scaffold_167_corr_3_np12_95
Type: pfam
Location: 98565 - 99029 (-)
Gene ID: B11_scaffold_167_corr_3_np12_96
Type: sulfatase
Location: 99094 - 99990 (-)
Gene ID: B11_scaffold_167_corr_3_np12_97
Type: TC
Location: 100281 - 101228 (-)
Gene ID: B11_scaffold_167_corr_3_np12_98
Type: pfam
Location: 101308 - 102162 (-)
Gene ID: B11_scaffold_167_corr_3_np12_99
Type: TC
Location: 102190 - 103137 (-)
Gene ID: B11_scaffold_167_corr_3_np12_100
Type: TF
Location: 103242 - 104504 (-)
Gene ID: B11_scaffold_167_corr_3_np12_101
Type: TC
Location: 104854 - 106299 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B11_scaffold_167_corr_3_np12_85 vegetarian > omnivore 1.10679 0.04112
B11_scaffold_167_corr_3_np12_86 vegetarian > vegan 1.13916 0.01276

🧭 Explore Read Mapping of CGC

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