Cluster: B11.bin_2_CGC15
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: B11.bin_2
- CGC Family ID: CGCFAM_07404
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1831 | 2001139 | 2003040 | - | GH2 |
| TC | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1832 | 2003099 | 2004469 | - | 2.A.2.3.5 |
| TC | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1833 | 2004783 | 2005337 | - | 2.A.51.1.6 |
| pfam | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1834 | 2005334 | 2005906 | - | Chromate_transp |
| STP | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1835 | 2006022 | 2007521 | - | SBP_bac_1 |
| TC | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1836 | 2007566 | 2008408 | - | 3.A.1.1.27 |
| TC | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1837 | 2008421 | 2009368 | - | 3.A.1.1.4 |
| sulfatase | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1838 | 2009349 | 2010875 | - | S1_43 |
| TF | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1839 | 2011035 | 2011916 | + | HTH_AraC | HTH_AraC |
| CAZyme | B11_scaffold_167_corr_7_np12 | B11_scaffold_167_corr_7_np12_1840 | 2012174 | 2013328 | - | CE9 |
Gene ID: B11_scaffold_167_corr_7_np12_1831
Type: CAZyme
Location: 2001139 - 2003040 (-)
Type: CAZyme
Location: 2001139 - 2003040 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1832
Type: TC
Location: 2003099 - 2004469 (-)
Type: TC
Location: 2003099 - 2004469 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1833
Type: TC
Location: 2004783 - 2005337 (-)
Type: TC
Location: 2004783 - 2005337 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1834
Type: pfam
Location: 2005334 - 2005906 (-)
Type: pfam
Location: 2005334 - 2005906 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1835
Type: STP
Location: 2006022 - 2007521 (-)
Type: STP
Location: 2006022 - 2007521 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1836
Type: TC
Location: 2007566 - 2008408 (-)
Type: TC
Location: 2007566 - 2008408 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1837
Type: TC
Location: 2008421 - 2009368 (-)
Type: TC
Location: 2008421 - 2009368 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1838
Type: sulfatase
Location: 2009349 - 2010875 (-)
Type: sulfatase
Location: 2009349 - 2010875 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1839
Type: TF
Location: 2011035 - 2011916 (+)
Type: TF
Location: 2011035 - 2011916 (+)
Gene ID: B11_scaffold_167_corr_7_np12_1840
Type: CAZyme
Location: 2012174 - 2013328 (-)
Type: CAZyme
Location: 2012174 - 2013328 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster sp900541315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B11_scaffold_167_corr_7_np12_1834 | vegetarian > vegan | 1.46457 | 0.01447 |
| B11_scaffold_167_corr_7_np12_1835 | vegetarian > vegan | 1.38427 | 0.01276 |
| B11_scaffold_167_corr_7_np12_1837 | vegetarian > vegan | 1.46754 | 0.01276 |
| B11_scaffold_167_corr_7_np12_1838 | vegetarian > vegan | 1.54644 | 0.01276 |
| B11_scaffold_167_corr_7_np12_1839 | vegetarian > omnivore | 1.14850 | 0.04752 |
| B11_scaffold_167_corr_7_np12_1839 | vegetarian > vegan | 1.29075 | 0.01276 |