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Cluster: B11.bin_2_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1273 1382884 1384152 - 2.A.23.1.3
pfam B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1274 1384530 1385060 + DUF3877
TF B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1275 1385067 1385609 - PadR
TC B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1276 1385818 1386522 + 2.A.115.2.8
STP B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1277 1387037 1388983 + Pyr_redox_2
pfam B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1278 1389359 1391308 + MCRA | NAD_binding_8
TC B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1279 1391348 1391989 - 2.A.115.2.10
pfam B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1280 1392250 1393203 + EamA | EamA
pfam B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1281 1393326 1394393 + DnaJ | DnaJ_C
CAZyme B11_scaffold_167_corr_7_np12 B11_scaffold_167_corr_7_np12_1282 1394456 1397458 + GH3
Gene ID: B11_scaffold_167_corr_7_np12_1273
Type: TC
Location: 1382884 - 1384152 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1274
Type: pfam
Location: 1384530 - 1385060 (+)
Gene ID: B11_scaffold_167_corr_7_np12_1275
Type: TF
Location: 1385067 - 1385609 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1276
Type: TC
Location: 1385818 - 1386522 (+)
Gene ID: B11_scaffold_167_corr_7_np12_1277
Type: STP
Location: 1387037 - 1388983 (+)
Gene ID: B11_scaffold_167_corr_7_np12_1278
Type: pfam
Location: 1389359 - 1391308 (+)
Gene ID: B11_scaffold_167_corr_7_np12_1279
Type: TC
Location: 1391348 - 1391989 (-)
Gene ID: B11_scaffold_167_corr_7_np12_1280
Type: pfam
Location: 1392250 - 1393203 (+)
Gene ID: B11_scaffold_167_corr_7_np12_1281
Type: pfam
Location: 1393326 - 1394393 (+)
Gene ID: B11_scaffold_167_corr_7_np12_1282
Type: CAZyme
Location: 1394456 - 1397458 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B11_scaffold_167_corr_7_np12_1273 vegetarian > omnivore 1.00186 0.04752

🧭 Explore Read Mapping of CGC

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