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Cluster: AG526_bin.4_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_230149 k141_230149_4 5335 6771 + 1.B.52.2.2
TF k141_230149 k141_230149_5 6876 7619 + LytTR
STP k141_230149 k141_230149_6 7616 8278 + HATPase_c
TC k141_230149 k141_230149_7 8508 10364 + 3.A.1.106.1
TC k141_230149 k141_230149_8 10339 12153 + 3.A.1.111.2
CAZyme k141_230149 k141_230149_9 12299 16438 + GH25
pfam k141_230149 k141_230149_10 16458 18800 + Flg_new | Flg_new | Flg_new | Flg_new | Flg_new | Flg_new | Phage_lysozyme2 | Flg_new_2 | Flg_new_2
pfam k141_230149 k141_230149_11 18807 19811 + Dus
CAZyme k141_230149 k141_230149_12 19911 21464 + GH43_4
TC k141_230149 k141_230149_13 21577 22962 + 2.A.25.1.4
CAZyme k141_230149 k141_230149_14 23128 24090 + GH43_26
CAZyme k141_230149 k141_230149_15 24107 25612 + GH51_1
pfam k141_230149 k141_230149_16 25702 25944 + DUF6171
pfam k141_230149 k141_230149_17 25938 26186 + DUF6061
TC k141_230149 k141_230149_18 26277 26534 - 3.A.1.135.8
Gene ID: k141_230149_4
Type: TC
Location: 5335 - 6771 (+)
Gene ID: k141_230149_5
Type: TF
Location: 6876 - 7619 (+)
Gene ID: k141_230149_6
Type: STP
Location: 7616 - 8278 (+)
Gene ID: k141_230149_7
Type: TC
Location: 8508 - 10364 (+)
Gene ID: k141_230149_8
Type: TC
Location: 10339 - 12153 (+)
Gene ID: k141_230149_9
Type: CAZyme
Location: 12299 - 16438 (+)
Gene ID: k141_230149_10
Type: pfam
Location: 16458 - 18800 (+)
Gene ID: k141_230149_11
Type: pfam
Location: 18807 - 19811 (+)
Gene ID: k141_230149_12
Type: CAZyme
Location: 19911 - 21464 (+)
Gene ID: k141_230149_13
Type: TC
Location: 21577 - 22962 (+)
Gene ID: k141_230149_14
Type: CAZyme
Location: 23128 - 24090 (+)
Gene ID: k141_230149_15
Type: CAZyme
Location: 24107 - 25612 (+)
Gene ID: k141_230149_16
Type: pfam
Location: 25702 - 25944 (+)
Gene ID: k141_230149_17
Type: pfam
Location: 25938 - 26186 (+)
Gene ID: k141_230149_18
Type: TC
Location: 26277 - 26534 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_230149_4 vegan > omnivore 1.03515 0.00711
k141_230149_5 vegan > omnivore 1.52005 0.00711
k141_230149_5 vegetarian > omnivore 1.59453 0.00048
k141_230149_16 vegan > omnivore 1.56503 0.00711
k141_230149_16 vegetarian > vegan 1.22760 0.00692
k141_230149_16 vegetarian > omnivore 2.79264 0.00048
k141_230149_18 vegetarian > omnivore 1.79447 0.00048

🧭 Explore Read Mapping of CGC

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