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Cluster: AG526_bin.4_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53162 k141_53162_28 27589 28884 - 9.B.174.1.1
STP k141_53162 k141_53162_29 29212 30480 - Peptidase_M23
pfam k141_53162 k141_53162_30 30477 31385 - FtsX | FtsX_ECD
TC k141_53162 k141_53162_31 31375 32133 - 3.A.1.140.1
pfam k141_53162 k141_53162_32 32149 33330 - HTH_30 | GGDEF_2
pfam k141_53162 k141_53162_33 33532 34407 - YitT_membrane | DUF2179
CAZyme k141_53162 k141_53162_34 34416 35141 - GT26
TC k141_53162 k141_53162_35 35176 36861 - 2.A.114.1.3
Gene ID: k141_53162_28
Type: TC
Location: 27589 - 28884 (-)
Gene ID: k141_53162_29
Type: STP
Location: 29212 - 30480 (-)
Gene ID: k141_53162_30
Type: pfam
Location: 30477 - 31385 (-)
Gene ID: k141_53162_31
Type: TC
Location: 31375 - 32133 (-)
Gene ID: k141_53162_32
Type: pfam
Location: 32149 - 33330 (-)
Gene ID: k141_53162_33
Type: pfam
Location: 33532 - 34407 (-)
Gene ID: k141_53162_34
Type: CAZyme
Location: 34416 - 35141 (-)
Gene ID: k141_53162_35
Type: TC
Location: 35176 - 36861 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_53162_28 vegetarian > omnivore 1.10330 0.00048
k141_53162_31 vegetarian > vegan 1.14738 0.00085
k141_53162_34 vegan > omnivore 1.22501 0.00711
k141_53162_34 vegetarian > omnivore 1.32761 0.00048

🧭 Explore Read Mapping of CGC

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