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Cluster: AG526_bin.4_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_239608 k141_239608_29 38263 39609 + 2.A.66.1.33
pfam k141_239608 k141_239608_30 39797 40651 + YitT_membrane | DUF2179
TC k141_239608 k141_239608_31 40677 41672 + 9.B.34.1.3
TF k141_239608 k141_239608_32 42106 42981 - HTH_AraC | HTH_AraC
TC k141_239608 k141_239608_33 43177 44931 + 3.A.1.106.3
TC k141_239608 k141_239608_34 44933 46717 + 3.A.1.106.3
TF k141_239608 k141_239608_35 46815 48368 - HTH_AraC | HTH_AraC
CAZyme k141_239608 k141_239608_36 48594 50933 + GH31_3
CAZyme k141_239608 k141_239608_37 50933 51535 + GH3
Gene ID: k141_239608_29
Type: TC
Location: 38263 - 39609 (+)
Gene ID: k141_239608_30
Type: pfam
Location: 39797 - 40651 (+)
Gene ID: k141_239608_31
Type: TC
Location: 40677 - 41672 (+)
Gene ID: k141_239608_32
Type: TF
Location: 42106 - 42981 (-)
Gene ID: k141_239608_33
Type: TC
Location: 43177 - 44931 (+)
Gene ID: k141_239608_34
Type: TC
Location: 44933 - 46717 (+)
Gene ID: k141_239608_35
Type: TF
Location: 46815 - 48368 (-)
Gene ID: k141_239608_36
Type: CAZyme
Location: 48594 - 50933 (+)
Gene ID: k141_239608_37
Type: CAZyme
Location: 50933 - 51535 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_239608_31 vegan > omnivore 2.13544 0.00711
k141_239608_31 vegetarian > omnivore 1.95260 0.00048
k141_239608_35 vegetarian > omnivore 1.13312 0.00048
k141_239608_37 vegetarian > omnivore 1.32272 0.00048

🧭 Explore Read Mapping of CGC

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