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Cluster: AG526_bin.4_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_200932 k141_200932_2 2188 5022 - CBM32 | GH85
TF k141_200932 k141_200932_3 5306 6334 - LacI
TC k141_200932 k141_200932_4 6673 7626 + 3.A.1.1.29
TC k141_200932 k141_200932_5 7639 8559 + 3.A.1.1.29
pfam k141_200932 k141_200932_6 8607 10070 + DUF3502
CAZyme k141_200932 k141_200932_7 10085 11071 + GH130_2
NULL(UNKNOWN) k141_200932 k141_200932_8 11165 13276 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_200932 k141_200932_9 13292 15547 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_200932 k141_200932_10 15651 18740 + GH38
pfam k141_200932 k141_200932_11 18814 20106 + MFS_1
CAZyme k141_200932 k141_200932_12 20117 22312 + GH3
CAZyme k141_200932 k141_200932_13 22344 24185 + GH20
TF k141_200932 k141_200932_14 24395 24943 + SpoVT_AbrB
pfam k141_200932 k141_200932_15 25075 26133 + Metallophos
TC k141_200932 k141_200932_16 26124 27809 + 1.C.105.2.8
CAZyme k141_200932 k141_200932_17 27823 30099 + GT51
pfam k141_200932 k141_200932_18 30297 31235 + ROK
TC k141_200932 k141_200932_19 31304 31987 - 2.A.88.3.1
Gene ID: k141_200932_2
Type: CAZyme
Location: 2188 - 5022 (-)
Gene ID: k141_200932_3
Type: TF
Location: 5306 - 6334 (-)
Gene ID: k141_200932_4
Type: TC
Location: 6673 - 7626 (+)
Gene ID: k141_200932_5
Type: TC
Location: 7639 - 8559 (+)
Gene ID: k141_200932_6
Type: pfam
Location: 8607 - 10070 (+)
Gene ID: k141_200932_7
Type: CAZyme
Location: 10085 - 11071 (+)
Gene ID: k141_200932_8
Type:
Location: 11165 - 13276 (+)
Gene ID: k141_200932_9
Type:
Location: 13292 - 15547 (+)
Gene ID: k141_200932_10
Type: CAZyme
Location: 15651 - 18740 (+)
Gene ID: k141_200932_11
Type: pfam
Location: 18814 - 20106 (+)
Gene ID: k141_200932_12
Type: CAZyme
Location: 20117 - 22312 (+)
Gene ID: k141_200932_13
Type: CAZyme
Location: 22344 - 24185 (+)
Gene ID: k141_200932_14
Type: TF
Location: 24395 - 24943 (+)
Gene ID: k141_200932_15
Type: pfam
Location: 25075 - 26133 (+)
Gene ID: k141_200932_16
Type: TC
Location: 26124 - 27809 (+)
Gene ID: k141_200932_17
Type: CAZyme
Location: 27823 - 30099 (+)
Gene ID: k141_200932_18
Type: pfam
Location: 30297 - 31235 (+)
Gene ID: k141_200932_19
Type: TC
Location: 31304 - 31987 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_200932_3 vegetarian > omnivore 1.03739 0.00048
k141_200932_3 vegetarian > vegan 1.34687 0.00692
k141_200932_4 vegetarian > vegan 1.86883 0.00692
k141_200932_4 vegetarian > omnivore 1.26428 0.00048
k141_200932_7 vegetarian > vegan 1.03607 0.00085
k141_200932_11 vegetarian > vegan 1.03592 0.00692
k141_200932_12 vegetarian > omnivore 1.17663 0.00048

🧭 Explore Read Mapping of CGC

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