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Cluster: AG526_bin.4_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_93502 k141_93502_9 9075 10010 + GH113
pfam k141_93502 k141_93502_10 10142 11860 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_93502 k141_93502_11 11877 14072 + GH36
TF k141_93502 k141_93502_12 14086 15111 + LacI
STP k141_93502 k141_93502_13 16515 17981 + SBP_bac_1
TC k141_93502 k141_93502_14 18053 19057 + 3.A.1.1.23
TC k141_93502 k141_93502_15 19062 19937 + 3.A.1.1.27
pfam k141_93502 k141_93502_16 19959 21188 + GlcNAc_2-epim
CAZyme k141_93502 k141_93502_17 21232 22410 + GH130_1
CAZyme k141_93502 k141_93502_18 22531 23553 + GH130_2
Gene ID: k141_93502_9
Type: CAZyme
Location: 9075 - 10010 (+)
Gene ID: k141_93502_10
Type: pfam
Location: 10142 - 11860 (+)
Gene ID: k141_93502_11
Type: CAZyme
Location: 11877 - 14072 (+)
Gene ID: k141_93502_12
Type: TF
Location: 14086 - 15111 (+)
Gene ID: k141_93502_13
Type: STP
Location: 16515 - 17981 (+)
Gene ID: k141_93502_14
Type: TC
Location: 18053 - 19057 (+)
Gene ID: k141_93502_15
Type: TC
Location: 19062 - 19937 (+)
Gene ID: k141_93502_16
Type: pfam
Location: 19959 - 21188 (+)
Gene ID: k141_93502_17
Type: CAZyme
Location: 21232 - 22410 (+)
Gene ID: k141_93502_18
Type: CAZyme
Location: 22531 - 23553 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_93502_16 vegetarian > omnivore 1.03890 0.00048

🧭 Explore Read Mapping of CGC

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