Cluster: AG526_bin.4_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: AG526_bin.4
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_230754 | k141_230754_23 | 22042 | 23154 | - | GT111 |
| pfam | k141_230754 | k141_230754_24 | 23262 | 24227 | - | Ldh_1_N | Ldh_1_C |
| TC | k141_230754 | k141_230754_25 | 24403 | 26256 | - | 3.A.1.135.6 |
| TC | k141_230754 | k141_230754_26 | 26249 | 28570 | - | 3.A.1.135.6 |
Gene ID: k141_230754_23
Type: CAZyme
Location: 22042 - 23154 (-)
Type: CAZyme
Location: 22042 - 23154 (-)
Gene ID: k141_230754_24
Type: pfam
Location: 23262 - 24227 (-)
Type: pfam
Location: 23262 - 24227 (-)
Gene ID: k141_230754_25
Type: TC
Location: 24403 - 26256 (-)
Type: TC
Location: 24403 - 26256 (-)
Gene ID: k141_230754_26
Type: TC
Location: 26249 - 28570 (-)
Type: TC
Location: 26249 - 28570 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp003483745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_230754_23 | vegan > omnivore | 1.74063 | 0.00711 |
| k141_230754_23 | vegetarian > omnivore | 1.92967 | 0.00048 |