Cluster: AG526_bin.4_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: AG526_bin.4
- CGC Family ID: CGCFAM_00045
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_189040 | k141_189040_3 | 1112 | 2878 | - | CBM34 | GH13_20 |
| TC | k141_189040 | k141_189040_4 | 2886 | 3731 | - | 3.A.1.1.6 |
| TC | k141_189040 | k141_189040_5 | 3724 | 4617 | - | 3.A.1.1.22 |
| TC | k141_189040 | k141_189040_6 | 4672 | 5934 | - | 3.A.1.1.16 |
| TF | k141_189040 | k141_189040_7 | 6136 | 7155 | + | LacI |
| NULL(UNKNOWN) | k141_189040 | k141_189040_8 | 7325 | 7552 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_189040 | k141_189040_9 | 7597 | 9342 | - | GH35 |
Gene ID: k141_189040_3
Type: CAZyme
Location: 1112 - 2878 (-)
Type: CAZyme
Location: 1112 - 2878 (-)
Gene ID: k141_189040_4
Type: TC
Location: 2886 - 3731 (-)
Type: TC
Location: 2886 - 3731 (-)
Gene ID: k141_189040_5
Type: TC
Location: 3724 - 4617 (-)
Type: TC
Location: 3724 - 4617 (-)
Gene ID: k141_189040_6
Type: TC
Location: 4672 - 5934 (-)
Type: TC
Location: 4672 - 5934 (-)
Gene ID: k141_189040_7
Type: TF
Location: 6136 - 7155 (+)
Type: TF
Location: 6136 - 7155 (+)
Gene ID: k141_189040_8
Type:
Location: 7325 - 7552 (-)
Type:
Location: 7325 - 7552 (-)
Gene ID: k141_189040_9
Type: CAZyme
Location: 7597 - 9342 (-)
Type: CAZyme
Location: 7597 - 9342 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp003483745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_189040_3 | vegetarian > omnivore | 1.01274 | 0.00048 |
| k141_189040_3 | vegetarian > vegan | 1.17551 | 0.00692 |
| k141_189040_4 | vegetarian > omnivore | 1.19159 | 0.00048 |
| k141_189040_4 | vegetarian > vegan | 1.28010 | 0.00692 |
| k141_189040_5 | vegetarian > omnivore | 1.02241 | 0.00048 |
| k141_189040_6 | vegetarian > omnivore | 1.46520 | 0.00048 |
| k141_189040_6 | vegetarian > vegan | 1.32605 | 0.00692 |
| k141_189040_7 | vegetarian > omnivore | 1.05585 | 0.00048 |