Cluster: AG526_bin.4_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: AG526_bin.4
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_232618 | k141_232618_1 | 1 | 1341 | - | 3.A.1.2.20 |
| CAZyme | k141_232618 | k141_232618_2 | 1579 | 4074 | + | GH39 |
| pfam | k141_232618 | k141_232618_3 | 4064 | 4711 | - | Hydrolase | HAD_2 |
| TF | k141_232618 | k141_232618_4 | 4826 | 5794 | - | HTH_AraC |
| TC | k141_232618 | k141_232618_5 | 5825 | 7462 | - | 2.A.1.15.16 |
Gene ID: k141_232618_1
Type: TC
Location: 1 - 1341 (-)
Type: TC
Location: 1 - 1341 (-)
Gene ID: k141_232618_2
Type: CAZyme
Location: 1579 - 4074 (+)
Type: CAZyme
Location: 1579 - 4074 (+)
Gene ID: k141_232618_3
Type: pfam
Location: 4064 - 4711 (-)
Type: pfam
Location: 4064 - 4711 (-)
Gene ID: k141_232618_4
Type: TF
Location: 4826 - 5794 (-)
Type: TF
Location: 4826 - 5794 (-)
Gene ID: k141_232618_5
Type: TC
Location: 5825 - 7462 (-)
Type: TC
Location: 5825 - 7462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp003483745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_232618_1 | vegan > omnivore | 1.63709 | 0.00711 |
| k141_232618_2 | vegan > omnivore | 1.66407 | 0.00711 |
| k141_232618_3 | vegan > omnivore | 2.71385 | 0.00711 |
| k141_232618_3 | vegetarian > omnivore | 1.43413 | 0.00048 |
| k141_232618_4 | vegetarian > omnivore | 1.74937 | 0.00048 |