Cluster: AG526_bin.4_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: AG526_bin.4
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_143522 | k141_143522_16 | 21492 | 22856 | + | 2.A.86.1.8 |
| STP | k141_143522 | k141_143522_17 | 23009 | 25555 | + | TPR_2 |
| CAZyme | k141_143522 | k141_143522_18 | 25603 | 27501 | + | CBM48 | GH13_9 |
| pfam | k141_143522 | k141_143522_19 | 27741 | 30887 | + | DUF6240 | DUF6240 |
| pfam | k141_143522 | k141_143522_20 | 30903 | 31676 | - | Amidase_3 |
| CAZyme | k141_143522 | k141_143522_21 | 31747 | 33579 | - | GH18 |
Gene ID: k141_143522_16
Type: TC
Location: 21492 - 22856 (+)
Type: TC
Location: 21492 - 22856 (+)
Gene ID: k141_143522_17
Type: STP
Location: 23009 - 25555 (+)
Type: STP
Location: 23009 - 25555 (+)
Gene ID: k141_143522_18
Type: CAZyme
Location: 25603 - 27501 (+)
Type: CAZyme
Location: 25603 - 27501 (+)
Gene ID: k141_143522_19
Type: pfam
Location: 27741 - 30887 (+)
Type: pfam
Location: 27741 - 30887 (+)
Gene ID: k141_143522_20
Type: pfam
Location: 30903 - 31676 (-)
Type: pfam
Location: 30903 - 31676 (-)
Gene ID: k141_143522_21
Type: CAZyme
Location: 31747 - 33579 (-)
Type: CAZyme
Location: 31747 - 33579 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp003483745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_143522_17 | vegetarian > omnivore | 1.06607 | 0.00048 |
| k141_143522_19 | vegetarian > omnivore | 1.04292 | 0.00048 |
| k141_143522_20 | vegan > omnivore | 1.03651 | 0.00711 |
| k141_143522_20 | vegetarian > omnivore | 1.04985 | 0.00048 |
| k141_143522_21 | vegetarian > omnivore | 1.25792 | 0.00048 |