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Cluster: AG526_bin.4_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_27689 k141_27689_3 826 1875 - GT2
pfam k141_27689 k141_27689_4 1982 3403 - DUF4832 | DUF4874
pfam k141_27689 k141_27689_5 3405 4655 - NTP_transf_5
TC k141_27689 k141_27689_6 4639 6153 - 2.A.66.1.40
CAZyme k141_27689 k141_27689_7 6254 7240 - GT2
pfam k141_27689 k141_27689_8 7259 8497 - DUF4832 | DUF4874
CAZyme k141_27689 k141_27689_9 8472 9263 - GT2
CAZyme k141_27689 k141_27689_10 9304 10527 - GT4
NULL(UNKNOWN) k141_27689 k141_27689_11 10499 10882 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_27689 k141_27689_12 10879 12333 - PelG
CAZyme k141_27689 k141_27689_13 12337 13779 - GT4
Gene ID: k141_27689_3
Type: CAZyme
Location: 826 - 1875 (-)
Gene ID: k141_27689_4
Type: pfam
Location: 1982 - 3403 (-)
Gene ID: k141_27689_5
Type: pfam
Location: 3405 - 4655 (-)
Gene ID: k141_27689_6
Type: TC
Location: 4639 - 6153 (-)
Gene ID: k141_27689_7
Type: CAZyme
Location: 6254 - 7240 (-)
Gene ID: k141_27689_8
Type: pfam
Location: 7259 - 8497 (-)
Gene ID: k141_27689_9
Type: CAZyme
Location: 8472 - 9263 (-)
Gene ID: k141_27689_10
Type: CAZyme
Location: 9304 - 10527 (-)
Gene ID: k141_27689_11
Type:
Location: 10499 - 10882 (-)
Gene ID: k141_27689_12
Type: pfam
Location: 10879 - 12333 (-)
Gene ID: k141_27689_13
Type: CAZyme
Location: 12337 - 13779 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_27689_5 vegan > omnivore 1.96848 0.00711
k141_27689_5 vegetarian > omnivore 1.91749 0.00048
k141_27689_9 vegan > omnivore 1.24928 0.00711
k141_27689_9 vegetarian > omnivore 1.81214 0.00048
k141_27689_10 vegan > omnivore 1.03455 0.00711

🧭 Explore Read Mapping of CGC

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