Cluster: AG526_bin.4_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: AG526_bin.4
- CGC Family ID: CGCFAM_00003
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_45254 | k141_45254_16 | 21971 | 23416 | - | 2.A.66.2.16 |
| CAZyme | k141_45254 | k141_45254_17 | 23409 | 24347 | - | GT2 |
| CAZyme | k141_45254 | k141_45254_18 | 24389 | 25222 | - | GT2 |
| pfam | k141_45254 | k141_45254_19 | 25276 | 26220 | - | Glycos_transf_2 |
| pfam | k141_45254 | k141_45254_20 | 26234 | 27148 | - | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | k141_45254 | k141_45254_21 | 27159 | 28313 | - | GT4 |
| CAZyme | k141_45254 | k141_45254_22 | 28323 | 29438 | - | GT4 |
| CAZyme | k141_45254 | k141_45254_23 | 29435 | 30640 | - | GT4 |
Gene ID: k141_45254_16
Type: TC
Location: 21971 - 23416 (-)
Type: TC
Location: 21971 - 23416 (-)
Gene ID: k141_45254_17
Type: CAZyme
Location: 23409 - 24347 (-)
Type: CAZyme
Location: 23409 - 24347 (-)
Gene ID: k141_45254_18
Type: CAZyme
Location: 24389 - 25222 (-)
Type: CAZyme
Location: 24389 - 25222 (-)
Gene ID: k141_45254_19
Type: pfam
Location: 25276 - 26220 (-)
Type: pfam
Location: 25276 - 26220 (-)
Gene ID: k141_45254_20
Type: pfam
Location: 26234 - 27148 (-)
Type: pfam
Location: 26234 - 27148 (-)
Gene ID: k141_45254_21
Type: CAZyme
Location: 27159 - 28313 (-)
Type: CAZyme
Location: 27159 - 28313 (-)
Gene ID: k141_45254_22
Type: CAZyme
Location: 28323 - 29438 (-)
Type: CAZyme
Location: 28323 - 29438 (-)
Gene ID: k141_45254_23
Type: CAZyme
Location: 29435 - 30640 (-)
Type: CAZyme
Location: 29435 - 30640 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp003483745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_45254_17 | vegetarian > omnivore | 1.45627 | 0.00048 |
| k141_45254_18 | vegetarian > omnivore | 1.11742 | 0.00048 |
| k141_45254_19 | vegetarian > omnivore | 1.33578 | 0.00048 |
| k141_45254_20 | vegetarian > omnivore | 1.35494 | 0.00048 |
| k141_45254_21 | vegetarian > omnivore | 1.32564 | 0.00048 |
| k141_45254_22 | vegetarian > omnivore | 1.34996 | 0.00048 |
| k141_45254_22 | vegetarian > vegan | 1.07057 | 0.00085 |
| k141_45254_23 | vegetarian > omnivore | 1.12519 | 0.00048 |