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Cluster: AG524_bin.9_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_62158 k141_62158_9 9067 10485 + 2.A.66.1.28
CAZyme k141_62158 k141_62158_10 10512 11546 + GH20
TF k141_62158 k141_62158_11 11654 12097 + HTH_3
pfam k141_62158 k141_62158_12 12241 13056 + Polysacc_deac_1
CAZyme k141_62158 k141_62158_13 13197 15170 + GH151
pfam k141_62158 k141_62158_14 15186 15857 + Lyx_isomer
STP k141_62158 k141_62158_15 15965 17638 - Sigma70_r2 | Sigma70_r4_2
CAZyme k141_62158 k141_62158_16 17752 19206 - GH20
TF k141_62158 k141_62158_17 19547 20038 + MarR
TC k141_62158 k141_62158_18 20070 21827 + 3.A.1.135.5
TC k141_62158 k141_62158_19 21817 23751 + 3.A.1.135.5
Gene ID: k141_62158_9
Type: TC
Location: 9067 - 10485 (+)
Gene ID: k141_62158_10
Type: CAZyme
Location: 10512 - 11546 (+)
Gene ID: k141_62158_11
Type: TF
Location: 11654 - 12097 (+)
Gene ID: k141_62158_12
Type: pfam
Location: 12241 - 13056 (+)
Gene ID: k141_62158_13
Type: CAZyme
Location: 13197 - 15170 (+)
Gene ID: k141_62158_14
Type: pfam
Location: 15186 - 15857 (+)
Gene ID: k141_62158_15
Type: STP
Location: 15965 - 17638 (-)
Gene ID: k141_62158_16
Type: CAZyme
Location: 17752 - 19206 (-)
Gene ID: k141_62158_17
Type: TF
Location: 19547 - 20038 (+)
Gene ID: k141_62158_18
Type: TC
Location: 20070 - 21827 (+)
Gene ID: k141_62158_19
Type: TC
Location: 21817 - 23751 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1696
→
Species
UMGS1696 sp934433485

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_62158_9 vegetarian > omnivore 1.58165 0.01882
k141_62158_14 vegetarian > omnivore 2.77444 0.01882

🧭 Explore Read Mapping of CGC

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