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Cluster: AG523_68_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_52383 k141_52383_3 2600 5743 + 1.B.14.6.1
pfam k141_52383 k141_52383_4 5776 7497 + SusD_RagB | SusD-like_3
pfam k141_52383 k141_52383_5 7531 8538 + DUF5017
CAZyme k141_52383 k141_52383_6 8906 10771 + GH93
CAZyme k141_52383 k141_52383_7 10837 12678 + CBM9 | GH93
CAZyme k141_52383 k141_52383_8 12702 14657 + GH93
CAZyme k141_52383 k141_52383_9 14725 16680 + GH93
CAZyme k141_52383 k141_52383_10 16722 18671 + GH93
TF k141_52383 k141_52383_11 18679 22800 + HTH_AraC
CAZyme k141_52383 k141_52383_12 22879 23856 + GT90
Gene ID: k141_52383_3
Type: TC
Location: 2600 - 5743 (+)
Gene ID: k141_52383_4
Type: pfam
Location: 5776 - 7497 (+)
Gene ID: k141_52383_5
Type: pfam
Location: 7531 - 8538 (+)
Gene ID: k141_52383_6
Type: CAZyme
Location: 8906 - 10771 (+)
Gene ID: k141_52383_7
Type: CAZyme
Location: 10837 - 12678 (+)
Gene ID: k141_52383_8
Type: CAZyme
Location: 12702 - 14657 (+)
Gene ID: k141_52383_9
Type: CAZyme
Location: 14725 - 16680 (+)
Gene ID: k141_52383_10
Type: CAZyme
Location: 16722 - 18671 (+)
Gene ID: k141_52383_11
Type: TF
Location: 18679 - 22800 (+)
Gene ID: k141_52383_12
Type: CAZyme
Location: 22879 - 23856 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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