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Cluster: AG523_68_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_113547 k141_113547_17 20155 21810 + 9.B.174.1.1
pfam k141_113547 k141_113547_18 21853 25281 + DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
CAZyme k141_113547 k141_113547_19 25521 26663 + GH43_33
CAZyme k141_113547 k141_113547_20 26714 28537 + GH2
CAZyme k141_113547 k141_113547_21 28691 31705 + GH43_31
pfam k141_113547 k141_113547_22 31920 32471 + PRiA4_ORF3
pfam k141_113547 k141_113547_23 32602 34794 + Viral_helicase1 | PIF1 | AAA_19 | UvrD_C_2 | AAA_30 | HTH_40
TC k141_113547 k141_113547_24 34805 35689 - 2.A.7.3.57
NULL(UNKNOWN) k141_113547 k141_113547_25 35770 36756 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_113547 k141_113547_26 36828 39077 - 1.B.14.8.4
Gene ID: k141_113547_17
Type: TC
Location: 20155 - 21810 (+)
Gene ID: k141_113547_18
Type: pfam
Location: 21853 - 25281 (+)
Gene ID: k141_113547_19
Type: CAZyme
Location: 25521 - 26663 (+)
Gene ID: k141_113547_20
Type: CAZyme
Location: 26714 - 28537 (+)
Gene ID: k141_113547_21
Type: CAZyme
Location: 28691 - 31705 (+)
Gene ID: k141_113547_22
Type: pfam
Location: 31920 - 32471 (+)
Gene ID: k141_113547_23
Type: pfam
Location: 32602 - 34794 (+)
Gene ID: k141_113547_24
Type: TC
Location: 34805 - 35689 (-)
Gene ID: k141_113547_25
Type:
Location: 35770 - 36756 (-)
Gene ID: k141_113547_26
Type: TC
Location: 36828 - 39077 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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