Cluster: AG513_bin.72_CGC5
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: AG513_bin.72
- CGC Family ID: CGCFAM_01855
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_61907 | k141_61907_121 | 125885 | 127483 | + | GT4 |
| CAZyme | k141_61907 | k141_61907_122 | 127476 | 128537 | + | GT2 |
| CAZyme | k141_61907 | k141_61907_123 | 128541 | 129578 | + | GT2 |
| TC | k141_61907 | k141_61907_124 | 129656 | 130441 | + | 3.A.1.103.6 |
| TC | k141_61907 | k141_61907_125 | 130466 | 132196 | + | 3.A.1.103.1 |
| pfam | k141_61907 | k141_61907_126 | 132205 | 133290 | + | Glyphos_transf |
| CAZyme | k141_61907 | k141_61907_127 | 133294 | 134256 | + | GT2 |
| CAZyme | k141_61907 | k141_61907_128 | 134291 | 135256 | + | GT2 |
| CAZyme | k141_61907 | k141_61907_129 | 135263 | 136120 | + | GT2 |
| TC | k141_61907 | k141_61907_130 | 136180 | 137583 | + | 9.B.18.1.1 |
| pfam | k141_61907 | k141_61907_131 | 137767 | 140160 | + | tRNA_anti-codon | tRNA_anti-codon | Rep_fac-A_C |
| pfam | k141_61907 | k141_61907_132 | 140173 | 141108 | + | RecA | ATPase | Rad51 | AAA_25 | HHH_5 |
| TC | k141_61907 | k141_61907_133 | 141200 | 142105 | + | 2.A.69.4.3 |
| STP | k141_61907 | k141_61907_134 | 142402 | 144387 | + | Fer4 | Pyr_redox_2 |
| TC | k141_61907 | k141_61907_135 | 144687 | 145727 | - | 3.A.1.10.3 |
| TC | k141_61907 | k141_61907_136 | 145783 | 146454 | - | 3.A.1.8.1 |
Gene ID: k141_61907_121
Type: CAZyme
Location: 125885 - 127483 (+)
Type: CAZyme
Location: 125885 - 127483 (+)
Gene ID: k141_61907_122
Type: CAZyme
Location: 127476 - 128537 (+)
Type: CAZyme
Location: 127476 - 128537 (+)
Gene ID: k141_61907_123
Type: CAZyme
Location: 128541 - 129578 (+)
Type: CAZyme
Location: 128541 - 129578 (+)
Gene ID: k141_61907_124
Type: TC
Location: 129656 - 130441 (+)
Type: TC
Location: 129656 - 130441 (+)
Gene ID: k141_61907_125
Type: TC
Location: 130466 - 132196 (+)
Type: TC
Location: 130466 - 132196 (+)
Gene ID: k141_61907_126
Type: pfam
Location: 132205 - 133290 (+)
Type: pfam
Location: 132205 - 133290 (+)
Gene ID: k141_61907_127
Type: CAZyme
Location: 133294 - 134256 (+)
Type: CAZyme
Location: 133294 - 134256 (+)
Gene ID: k141_61907_128
Type: CAZyme
Location: 134291 - 135256 (+)
Type: CAZyme
Location: 134291 - 135256 (+)
Gene ID: k141_61907_129
Type: CAZyme
Location: 135263 - 136120 (+)
Type: CAZyme
Location: 135263 - 136120 (+)
Gene ID: k141_61907_130
Type: TC
Location: 136180 - 137583 (+)
Type: TC
Location: 136180 - 137583 (+)
Gene ID: k141_61907_131
Type: pfam
Location: 137767 - 140160 (+)
Type: pfam
Location: 137767 - 140160 (+)
Gene ID: k141_61907_132
Type: pfam
Location: 140173 - 141108 (+)
Type: pfam
Location: 140173 - 141108 (+)
Gene ID: k141_61907_133
Type: TC
Location: 141200 - 142105 (+)
Type: TC
Location: 141200 - 142105 (+)
Gene ID: k141_61907_134
Type: STP
Location: 142402 - 144387 (+)
Type: STP
Location: 142402 - 144387 (+)
Gene ID: k141_61907_135
Type: TC
Location: 144687 - 145727 (-)
Type: TC
Location: 144687 - 145727 (-)
Gene ID: k141_61907_136
Type: TC
Location: 145783 - 146454 (-)
Type: TC
Location: 145783 - 146454 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanobrevibacter_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_61907_134 | vegan > omnivore | 1.74762 | 0.02973 |
| k141_61907_134 | vegetarian > omnivore | 1.41504 | 0.00000 |
| k141_61907_136 | vegan > omnivore | 20.95519 | 0.02973 |