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Cluster: AG513_bin.1_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_252112 k141_252112_38 43902 45419 + 8.A.59.2.1
TC k141_252112 k141_252112_39 45403 46422 + 3.A.1.2.14
TF k141_252112 k141_252112_40 46442 48055 + HTH_AraC | HTH_AraC
TF k141_252112 k141_252112_41 48057 49118 - GntR
TC k141_252112 k141_252112_42 49518 50522 + 3.A.1.2.1
TC k141_252112 k141_252112_43 50647 52182 + 3.A.1.2.23
TC k141_252112 k141_252112_44 52175 53269 + 3.A.1.2.14
TC k141_252112 k141_252112_45 53271 54293 + 3.A.1.2.14
TC k141_252112 k141_252112_46 54455 56212 + 1.B.52.2.2
CAZyme k141_252112 k141_252112_47 56358 58802 - GH94
Gene ID: k141_252112_38
Type: TC
Location: 43902 - 45419 (+)
Gene ID: k141_252112_39
Type: TC
Location: 45403 - 46422 (+)
Gene ID: k141_252112_40
Type: TF
Location: 46442 - 48055 (+)
Gene ID: k141_252112_41
Type: TF
Location: 48057 - 49118 (-)
Gene ID: k141_252112_42
Type: TC
Location: 49518 - 50522 (+)
Gene ID: k141_252112_43
Type: TC
Location: 50647 - 52182 (+)
Gene ID: k141_252112_44
Type: TC
Location: 52175 - 53269 (+)
Gene ID: k141_252112_45
Type: TC
Location: 53271 - 54293 (+)
Gene ID: k141_252112_46
Type: TC
Location: 54455 - 56212 (+)
Gene ID: k141_252112_47
Type: CAZyme
Location: 56358 - 58802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_252112_44 vegan > omnivore 1.31444 0.00222

🧭 Explore Read Mapping of CGC

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