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Cluster: AG513_bin.1_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_191776 k141_191776_2 1592 5719 + CBM22 | CBM86 | CBM9 | GH10
STP k141_191776 k141_191776_3 5895 7781 + GGDEF | Peripla_BP_3
CAZyme k141_191776 k141_191776_4 7787 9517 + CE17
CAZyme k141_191776 k141_191776_5 9527 11089 + CBM91 | GH43_12
CAZyme k141_191776 k141_191776_6 11185 13329 + GH3
TC k141_191776 k141_191776_7 13462 15255 + 8.A.59.2.1
TF k141_191776 k141_191776_8 15289 16884 + HTH_AraC | HTH_AraC
TC k141_191776 k141_191776_9 17025 18713 + 3.A.1.1.29
TC k141_191776 k141_191776_10 18789 19745 + 3.A.1.1.29
TC k141_191776 k141_191776_11 19758 20654 + 3.A.1.1.29
Gene ID: k141_191776_2
Type: CAZyme
Location: 1592 - 5719 (+)
Gene ID: k141_191776_3
Type: STP
Location: 5895 - 7781 (+)
Gene ID: k141_191776_4
Type: CAZyme
Location: 7787 - 9517 (+)
Gene ID: k141_191776_5
Type: CAZyme
Location: 9527 - 11089 (+)
Gene ID: k141_191776_6
Type: CAZyme
Location: 11185 - 13329 (+)
Gene ID: k141_191776_7
Type: TC
Location: 13462 - 15255 (+)
Gene ID: k141_191776_8
Type: TF
Location: 15289 - 16884 (+)
Gene ID: k141_191776_9
Type: TC
Location: 17025 - 18713 (+)
Gene ID: k141_191776_10
Type: TC
Location: 18789 - 19745 (+)
Gene ID: k141_191776_11
Type: TC
Location: 19758 - 20654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_191776_11 vegan > omnivore 1.21212 0.00222

🧭 Explore Read Mapping of CGC

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