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Cluster: AG513_bin.1_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_178172 k141_178172_19 10709 12019 + 2.A.66.1.34
TC k141_178172 k141_178172_20 12495 13922 + 2.A.25.1.4
pfam k141_178172 k141_178172_21 14096 14923 + SpoU_methylase
CAZyme k141_178172 k141_178172_22 15358 17757 + GH94
pfam k141_178172 k141_178172_23 17847 19265 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC k141_178172 k141_178172_24 19389 21263 + 8.A.59.2.1
STP k141_178172 k141_178172_25 21359 22675 + SBP_bac_1
TC k141_178172 k141_178172_26 22777 23712 + 3.A.1.1.21
TC k141_178172 k141_178172_27 23713 24561 + 3.A.1.1.18
TF k141_178172 k141_178172_28 24603 25394 + HTH_AraC | HTH_AraC
sulfatase k141_178172 k141_178172_29 25582 26316 + S1_9
CAZyme k141_178172 k141_178172_30 26367 27506 + CE9
Gene ID: k141_178172_19
Type: TC
Location: 10709 - 12019 (+)
Gene ID: k141_178172_20
Type: TC
Location: 12495 - 13922 (+)
Gene ID: k141_178172_21
Type: pfam
Location: 14096 - 14923 (+)
Gene ID: k141_178172_22
Type: CAZyme
Location: 15358 - 17757 (+)
Gene ID: k141_178172_23
Type: pfam
Location: 17847 - 19265 (+)
Gene ID: k141_178172_24
Type: TC
Location: 19389 - 21263 (+)
Gene ID: k141_178172_25
Type: STP
Location: 21359 - 22675 (+)
Gene ID: k141_178172_26
Type: TC
Location: 22777 - 23712 (+)
Gene ID: k141_178172_27
Type: TC
Location: 23713 - 24561 (+)
Gene ID: k141_178172_28
Type: TF
Location: 24603 - 25394 (+)
Gene ID: k141_178172_29
Type: sulfatase
Location: 25582 - 26316 (+)
Gene ID: k141_178172_30
Type: CAZyme
Location: 26367 - 27506 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_178172_25 vegetarian > omnivore 1.53386 0.01829
k141_178172_25 vegetarian > vegan 2.73390 0.00455

🧭 Explore Read Mapping of CGC

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