Cluster: AG513_bin.1_CGC19
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate:
- Genome ID: AG513_bin.1
- CGC Family ID: CGCFAM_07341
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_198305 | k141_198305_10 | 12577 | 13026 | - | 2.A.79.1.6 |
| TC | k141_198305 | k141_198305_11 | 13023 | 13799 | - | 2.A.79.1.5 |
| NULL(UNKNOWN) | k141_198305 | k141_198305_12 | 14554 | 14751 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_198305 | k141_198305_13 | 14735 | 15382 | + | 9.A.11.1.1 |
| pfam | k141_198305 | k141_198305_14 | 15372 | 15821 | + | SpoVAB |
| pfam | k141_198305 | k141_198305_15 | 15873 | 16208 | + | DUF3837 |
| CAZyme | k141_198305 | k141_198305_16 | 16899 | 18734 | + | GH55_1 |
| CAZyme | k141_198305 | k141_198305_17 | 18757 | 21468 | + | GH94 |
| CAZyme | k141_198305 | k141_198305_18 | 21530 | 24637 | + | GH161 |
| CAZyme | k141_198305 | k141_198305_19 | 24845 | 26194 | + | GH30_1 |
| STP | k141_198305 | k141_198305_20 | 26300 | 27694 | + | SBP_bac_1 |
| TC | k141_198305 | k141_198305_21 | 27945 | 28874 | + | 3.A.1.1.23 |
| TC | k141_198305 | k141_198305_22 | 28880 | 29716 | + | 3.A.1.1.34 |
| TC | k141_198305 | k141_198305_23 | 29962 | 31998 | + | 1.B.52.2.2 |
| STP | k141_198305 | k141_198305_24 | 32171 | 33814 | + | SBP_bac_1 |
| TC | k141_198305 | k141_198305_25 | 33815 | 35647 | + | 9.B.33.1.1 |
Gene ID: k141_198305_10
Type: TC
Location: 12577 - 13026 (-)
Type: TC
Location: 12577 - 13026 (-)
Gene ID: k141_198305_11
Type: TC
Location: 13023 - 13799 (-)
Type: TC
Location: 13023 - 13799 (-)
Gene ID: k141_198305_12
Type:
Location: 14554 - 14751 (+)
Type:
Location: 14554 - 14751 (+)
Gene ID: k141_198305_13
Type: TC
Location: 14735 - 15382 (+)
Type: TC
Location: 14735 - 15382 (+)
Gene ID: k141_198305_14
Type: pfam
Location: 15372 - 15821 (+)
Type: pfam
Location: 15372 - 15821 (+)
Gene ID: k141_198305_15
Type: pfam
Location: 15873 - 16208 (+)
Type: pfam
Location: 15873 - 16208 (+)
Gene ID: k141_198305_16
Type: CAZyme
Location: 16899 - 18734 (+)
Type: CAZyme
Location: 16899 - 18734 (+)
Gene ID: k141_198305_17
Type: CAZyme
Location: 18757 - 21468 (+)
Type: CAZyme
Location: 18757 - 21468 (+)
Gene ID: k141_198305_18
Type: CAZyme
Location: 21530 - 24637 (+)
Type: CAZyme
Location: 21530 - 24637 (+)
Gene ID: k141_198305_19
Type: CAZyme
Location: 24845 - 26194 (+)
Type: CAZyme
Location: 24845 - 26194 (+)
Gene ID: k141_198305_20
Type: STP
Location: 26300 - 27694 (+)
Type: STP
Location: 26300 - 27694 (+)
Gene ID: k141_198305_21
Type: TC
Location: 27945 - 28874 (+)
Type: TC
Location: 27945 - 28874 (+)
Gene ID: k141_198305_22
Type: TC
Location: 28880 - 29716 (+)
Type: TC
Location: 28880 - 29716 (+)
Gene ID: k141_198305_23
Type: TC
Location: 29962 - 31998 (+)
Type: TC
Location: 29962 - 31998 (+)
Gene ID: k141_198305_24
Type: STP
Location: 32171 - 33814 (+)
Type: STP
Location: 32171 - 33814 (+)
Gene ID: k141_198305_25
Type: TC
Location: 33815 - 35647 (+)
Type: TC
Location: 33815 - 35647 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900543445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.