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Cluster: AG513_bin.1_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_137542 k141_137542_41 39779 41176 + 2.A.40.2.1
TC k141_137542 k141_137542_42 41224 43338 - 1.B.52.2.1
TC k141_137542 k141_137542_43 43599 45137 + 3.A.1.3.20
TC k141_137542 k141_137542_44 45127 45867 + 3.A.1.3.25
TF k141_137542 k141_137542_45 46009 46485 + MarR
TC k141_137542 k141_137542_46 46469 48790 + 3.A.1.135.6
TC k141_137542 k141_137542_47 48783 50633 + 3.A.1.135.6
STP k141_137542 k141_137542_48 50826 51620 + Response_reg | Spo0A_C
CAZyme k141_137542 k141_137542_49 51664 53115 + GT5
pfam k141_137542 k141_137542_50 53152 54042 - DUF5688
TC k141_137542 k141_137542_51 54180 55253 - 3.A.1.11.7
TC k141_137542 k141_137542_52 55297 56079 - 3.A.1.11.7
TC k141_137542 k141_137542_53 56073 56897 - 3.A.1.11.8
TC k141_137542 k141_137542_54 56890 57963 - 3.A.1.11.8
Gene ID: k141_137542_41
Type: TC
Location: 39779 - 41176 (+)
Gene ID: k141_137542_42
Type: TC
Location: 41224 - 43338 (-)
Gene ID: k141_137542_43
Type: TC
Location: 43599 - 45137 (+)
Gene ID: k141_137542_44
Type: TC
Location: 45127 - 45867 (+)
Gene ID: k141_137542_45
Type: TF
Location: 46009 - 46485 (+)
Gene ID: k141_137542_46
Type: TC
Location: 46469 - 48790 (+)
Gene ID: k141_137542_47
Type: TC
Location: 48783 - 50633 (+)
Gene ID: k141_137542_48
Type: STP
Location: 50826 - 51620 (+)
Gene ID: k141_137542_49
Type: CAZyme
Location: 51664 - 53115 (+)
Gene ID: k141_137542_50
Type: pfam
Location: 53152 - 54042 (-)
Gene ID: k141_137542_51
Type: TC
Location: 54180 - 55253 (-)
Gene ID: k141_137542_52
Type: TC
Location: 55297 - 56079 (-)
Gene ID: k141_137542_53
Type: TC
Location: 56073 - 56897 (-)
Gene ID: k141_137542_54
Type: TC
Location: 56890 - 57963 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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