dbCAN Logo

Cluster: AG511_67_CGC87

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4908 k141_4908_46 50455 51396 - 3.A.5.1.1
pfam k141_4908 k141_4908_47 51449 55009 - SMC_N | SMC_hinge | AAA_15 | AAA_23
pfam k141_4908 k141_4908_48 55021 55740 - dsrm | Ribonuclease_3 | Ribonucleas_3_3 | RM44_endonuclase
TC k141_4908 k141_4908_49 55846 56073 - 3.D.1.6.4
pfam k141_4908 k141_4908_50 56093 57106 - FA_synthesis
CAZyme k141_4908 k141_4908_51 57504 58424 - GH43_34
TC k141_4908 k141_4908_52 58444 59325 - 3.A.1.1.9
TC k141_4908 k141_4908_53 59337 60257 - 3.A.1.1.9
Gene ID: k141_4908_46
Type: TC
Location: 50455 - 51396 (-)
Gene ID: k141_4908_47
Type: pfam
Location: 51449 - 55009 (-)
Gene ID: k141_4908_48
Type: pfam
Location: 55021 - 55740 (-)
Gene ID: k141_4908_49
Type: TC
Location: 55846 - 56073 (-)
Gene ID: k141_4908_50
Type: pfam
Location: 56093 - 57106 (-)
Gene ID: k141_4908_51
Type: CAZyme
Location: 57504 - 58424 (-)
Gene ID: k141_4908_52
Type: TC
Location: 58444 - 59325 (-)
Gene ID: k141_4908_53
Type: TC
Location: 59337 - 60257 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List