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Cluster: AG511_67_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_9987 k141_9987_6 7207 10206 + GH106
TF k141_9987 k141_9987_7 10278 11795 - HTH_AraC | HTH_AraC
TC k141_9987 k141_9987_8 11792 13534 - 9.B.33.1.1
STP k141_9987 k141_9987_9 13863 15215 + SBP_bac_1
TC k141_9987 k141_9987_10 15288 16202 + 3.A.1.1.3
TC k141_9987 k141_9987_11 16213 17070 + 3.A.1.1.6
CAZyme k141_9987 k141_9987_12 17429 19924 - GT35
pfam k141_9987 k141_9987_13 20173 23367 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
TC k141_9987 k141_9987_14 24217 25698 + 2.A.49.9.2
pfam k141_9987 k141_9987_15 26144 27601 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam k141_9987 k141_9987_16 27629 28510 + DegV
TC k141_9987 k141_9987_17 28646 29278 - 2.A.115.2.12
NULL(UNKNOWN) k141_9987 k141_9987_18 29309 30979 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_9987 k141_9987_19 31180 32814 - 3.A.1.1.9
TC k141_9987 k141_9987_20 32947 33816 - 3.A.1.1.10
TC k141_9987 k141_9987_21 33816 34757 - 3.A.1.1.10
CAZyme k141_9987 k141_9987_22 34790 35899 - GH105
Gene ID: k141_9987_6
Type: CAZyme
Location: 7207 - 10206 (+)
Gene ID: k141_9987_7
Type: TF
Location: 10278 - 11795 (-)
Gene ID: k141_9987_8
Type: TC
Location: 11792 - 13534 (-)
Gene ID: k141_9987_9
Type: STP
Location: 13863 - 15215 (+)
Gene ID: k141_9987_10
Type: TC
Location: 15288 - 16202 (+)
Gene ID: k141_9987_11
Type: TC
Location: 16213 - 17070 (+)
Gene ID: k141_9987_12
Type: CAZyme
Location: 17429 - 19924 (-)
Gene ID: k141_9987_13
Type: pfam
Location: 20173 - 23367 (-)
Gene ID: k141_9987_14
Type: TC
Location: 24217 - 25698 (+)
Gene ID: k141_9987_15
Type: pfam
Location: 26144 - 27601 (+)
Gene ID: k141_9987_16
Type: pfam
Location: 27629 - 28510 (+)
Gene ID: k141_9987_17
Type: TC
Location: 28646 - 29278 (-)
Gene ID: k141_9987_18
Type:
Location: 29309 - 30979 (-)
Gene ID: k141_9987_19
Type: TC
Location: 31180 - 32814 (-)
Gene ID: k141_9987_20
Type: TC
Location: 32947 - 33816 (-)
Gene ID: k141_9987_21
Type: TC
Location: 33816 - 34757 (-)
Gene ID: k141_9987_22
Type: CAZyme
Location: 34790 - 35899 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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