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Cluster: AG511_67_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_161114 k141_161114_57 76850 79528 + GH3
pfam k141_161114 k141_161114_58 79543 80274 - ABC2_membrane_4
TC k141_161114 k141_161114_59 80267 81205 - 3.A.1.131.1
STP k141_161114 k141_161114_60 81414 82499 - HATPase_c | HisKA
TF k141_161114 k141_161114_61 82487 83179 - Trans_reg_C
TC k141_161114 k141_161114_62 83436 84296 - 3.A.1.1.11
TC k141_161114 k141_161114_63 84315 85220 - 3.A.1.1.11
STP k141_161114 k141_161114_64 85369 86769 - SBP_bac_1
TF k141_161114 k141_161114_65 87068 87838 - HTH_AraC | HTH_AraC
CAZyme k141_161114 k141_161114_66 88212 89708 + GH39
CAZyme k141_161114 k141_161114_67 89737 91290 + GH35
TC k141_161114 k141_161114_68 91367 92377 + 3.A.1.132.1
TC k141_161114 k141_161114_69 92374 94548 + 3.A.1.132.1
pfam k141_161114 k141_161114_70 94548 95951 + DUF4340 | DUF4340
CAZyme k141_161114 k141_161114_71 95999 97636 + CBM91 | GH43_12
CAZyme k141_161114 k141_161114_72 98084 99922 + GH43_27
Gene ID: k141_161114_57
Type: CAZyme
Location: 76850 - 79528 (+)
Gene ID: k141_161114_58
Type: pfam
Location: 79543 - 80274 (-)
Gene ID: k141_161114_59
Type: TC
Location: 80267 - 81205 (-)
Gene ID: k141_161114_60
Type: STP
Location: 81414 - 82499 (-)
Gene ID: k141_161114_61
Type: TF
Location: 82487 - 83179 (-)
Gene ID: k141_161114_62
Type: TC
Location: 83436 - 84296 (-)
Gene ID: k141_161114_63
Type: TC
Location: 84315 - 85220 (-)
Gene ID: k141_161114_64
Type: STP
Location: 85369 - 86769 (-)
Gene ID: k141_161114_65
Type: TF
Location: 87068 - 87838 (-)
Gene ID: k141_161114_66
Type: CAZyme
Location: 88212 - 89708 (+)
Gene ID: k141_161114_67
Type: CAZyme
Location: 89737 - 91290 (+)
Gene ID: k141_161114_68
Type: TC
Location: 91367 - 92377 (+)
Gene ID: k141_161114_69
Type: TC
Location: 92374 - 94548 (+)
Gene ID: k141_161114_70
Type: pfam
Location: 94548 - 95951 (+)
Gene ID: k141_161114_71
Type: CAZyme
Location: 95999 - 97636 (+)
Gene ID: k141_161114_72
Type: CAZyme
Location: 98084 - 99922 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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