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Cluster: AG511_67_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_61030 k141_61030_47 51141 51851 + 3.A.1.15.3
TC k141_61030 k141_61030_48 51844 52662 + 3.A.1.15.10
TF k141_61030 k141_61030_49 52683 53510 - HTH_AraC
TC k141_61030 k141_61030_50 53736 54839 + 3.A.1.1.38
TC k141_61030 k141_61030_51 54852 55742 + 3.A.1.1.11
TC k141_61030 k141_61030_52 55756 56631 + 3.A.1.1.20
STP k141_61030 k141_61030_53 56628 58235 + SBP_bac_1
NULL(UNKNOWN) k141_61030 k141_61030_54 58337 59197 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_61030 k141_61030_55 59711 63133 + GH115
Gene ID: k141_61030_47
Type: TC
Location: 51141 - 51851 (+)
Gene ID: k141_61030_48
Type: TC
Location: 51844 - 52662 (+)
Gene ID: k141_61030_49
Type: TF
Location: 52683 - 53510 (-)
Gene ID: k141_61030_50
Type: TC
Location: 53736 - 54839 (+)
Gene ID: k141_61030_51
Type: TC
Location: 54852 - 55742 (+)
Gene ID: k141_61030_52
Type: TC
Location: 55756 - 56631 (+)
Gene ID: k141_61030_53
Type: STP
Location: 56628 - 58235 (+)
Gene ID: k141_61030_54
Type:
Location: 58337 - 59197 (+)
Gene ID: k141_61030_55
Type: CAZyme
Location: 59711 - 63133 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_61030_52 vegan > omnivore 1.01780 0.04072

🧭 Explore Read Mapping of CGC

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