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Cluster: AG511_67_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_8933 k141_8933_2 1626 3350 + 3.A.1.106.14
TC k141_8933 k141_8933_3 3431 4318 - 2.A.4.7.9
CAZyme k141_8933 k141_8933_4 4702 6459 - CBM34 | GH13_20
CAZyme k141_8933 k141_8933_5 6476 8437 - GH133
CAZyme k141_8933 k141_8933_6 8492 10465 - GH13_14
TC k141_8933 k141_8933_7 10522 11394 - 3.A.1.1.27
TC k141_8933 k141_8933_8 11397 12776 - 3.A.1.1.27
pfam k141_8933 k141_8933_9 12791 14026 - SBP_bac_1 | SBP_bac_8
TF k141_8933 k141_8933_10 14424 15464 + LacI
CAZyme k141_8933 k141_8933_11 15543 17348 - GH146
TC k141_8933 k141_8933_12 17400 18317 - 3.A.1.1.10
TC k141_8933 k141_8933_13 18329 19279 - 3.A.1.1.10
Gene ID: k141_8933_2
Type: TC
Location: 1626 - 3350 (+)
Gene ID: k141_8933_3
Type: TC
Location: 3431 - 4318 (-)
Gene ID: k141_8933_4
Type: CAZyme
Location: 4702 - 6459 (-)
Gene ID: k141_8933_5
Type: CAZyme
Location: 6476 - 8437 (-)
Gene ID: k141_8933_6
Type: CAZyme
Location: 8492 - 10465 (-)
Gene ID: k141_8933_7
Type: TC
Location: 10522 - 11394 (-)
Gene ID: k141_8933_8
Type: TC
Location: 11397 - 12776 (-)
Gene ID: k141_8933_9
Type: pfam
Location: 12791 - 14026 (-)
Gene ID: k141_8933_10
Type: TF
Location: 14424 - 15464 (+)
Gene ID: k141_8933_11
Type: CAZyme
Location: 15543 - 17348 (-)
Gene ID: k141_8933_12
Type: TC
Location: 17400 - 18317 (-)
Gene ID: k141_8933_13
Type: TC
Location: 18329 - 19279 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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