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Cluster: AG511_67_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48038 k141_48038_17 16694 19411 + 3.A.3.5.15
TF k141_48038 k141_48038_18 19687 20487 - HTH_AraC | HTH_AraC
CAZyme k141_48038 k141_48038_19 20916 22055 + GH88
CAZyme k141_48038 k141_48038_20 22100 23239 + GH154
TF k141_48038 k141_48038_21 23583 25148 + HTH_AraC | HTH_AraC
TC k141_48038 k141_48038_22 25145 26977 + 9.B.33.1.1
TC k141_48038 k141_48038_23 27416 28342 + 3.A.1.1.29
TC k141_48038 k141_48038_24 28360 29277 + 3.A.1.1.29
STP k141_48038 k141_48038_25 29312 30868 + SBP_bac_1
CAZyme k141_48038 k141_48038_26 30986 32437 + GH30
CAZyme k141_48038 k141_48038_27 32517 33632 + GH5_44
Gene ID: k141_48038_17
Type: TC
Location: 16694 - 19411 (+)
Gene ID: k141_48038_18
Type: TF
Location: 19687 - 20487 (-)
Gene ID: k141_48038_19
Type: CAZyme
Location: 20916 - 22055 (+)
Gene ID: k141_48038_20
Type: CAZyme
Location: 22100 - 23239 (+)
Gene ID: k141_48038_21
Type: TF
Location: 23583 - 25148 (+)
Gene ID: k141_48038_22
Type: TC
Location: 25145 - 26977 (+)
Gene ID: k141_48038_23
Type: TC
Location: 27416 - 28342 (+)
Gene ID: k141_48038_24
Type: TC
Location: 28360 - 29277 (+)
Gene ID: k141_48038_25
Type: STP
Location: 29312 - 30868 (+)
Gene ID: k141_48038_26
Type: CAZyme
Location: 30986 - 32437 (+)
Gene ID: k141_48038_27
Type: CAZyme
Location: 32517 - 33632 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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