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Cluster: AG511_67_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_26327 k141_26327_40 39901 41661 - 3.A.1.106.2
TF k141_26327 k141_26327_41 41952 42785 + HTH_AraC
CAZyme k141_26327 k141_26327_42 42813 45485 - CBM67 | GH78
TC k141_26327 k141_26327_43 45498 46379 - 3.A.1.1.9
TC k141_26327 k141_26327_44 46450 47388 - 3.A.1.1.9
STP k141_26327 k141_26327_45 47470 49146 - SBP_bac_1
pfam k141_26327 k141_26327_46 49887 51449 - LytR_cpsA_psr
CAZyme k141_26327 k141_26327_47 52002 53327 - GH3
Gene ID: k141_26327_40
Type: TC
Location: 39901 - 41661 (-)
Gene ID: k141_26327_41
Type: TF
Location: 41952 - 42785 (+)
Gene ID: k141_26327_42
Type: CAZyme
Location: 42813 - 45485 (-)
Gene ID: k141_26327_43
Type: TC
Location: 45498 - 46379 (-)
Gene ID: k141_26327_44
Type: TC
Location: 46450 - 47388 (-)
Gene ID: k141_26327_45
Type: STP
Location: 47470 - 49146 (-)
Gene ID: k141_26327_46
Type: pfam
Location: 49887 - 51449 (-)
Gene ID: k141_26327_47
Type: CAZyme
Location: 52002 - 53327 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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