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Cluster: AG511_67_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_99950 k141_99950_129 151229 151684 + 9.A.11.1.1
pfam k141_99950 k141_99950_130 151801 153186 - MatE | MatE
TF k141_99950 k141_99950_131 153510 154370 - HTH_AraC | HTH_AraC
TC k141_99950 k141_99950_132 154559 155842 + 3.A.1.1.40
TC k141_99950 k141_99950_133 155875 156846 + 3.A.1.1.11
TC k141_99950 k141_99950_134 156843 157691 + 3.A.1.1.11
CAZyme k141_99950 k141_99950_135 157729 159744 + GH42
pfam k141_99950 k141_99950_136 159787 160767 + Glyco_hydro_42 | Glyco_hydro_42M | Glyco_hydro_42C
CAZyme k141_99950 k141_99950_137 160839 163046 + GH36
TC k141_99950 k141_99950_138 163236 164285 + 9.A.11.1.1
Gene ID: k141_99950_129
Type: TC
Location: 151229 - 151684 (+)
Gene ID: k141_99950_130
Type: pfam
Location: 151801 - 153186 (-)
Gene ID: k141_99950_131
Type: TF
Location: 153510 - 154370 (-)
Gene ID: k141_99950_132
Type: TC
Location: 154559 - 155842 (+)
Gene ID: k141_99950_133
Type: TC
Location: 155875 - 156846 (+)
Gene ID: k141_99950_134
Type: TC
Location: 156843 - 157691 (+)
Gene ID: k141_99950_135
Type: CAZyme
Location: 157729 - 159744 (+)
Gene ID: k141_99950_136
Type: pfam
Location: 159787 - 160767 (+)
Gene ID: k141_99950_137
Type: CAZyme
Location: 160839 - 163046 (+)
Gene ID: k141_99950_138
Type: TC
Location: 163236 - 164285 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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