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Cluster: AG511_67_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_99950 k141_99950_7 5305 7704 - GH2
TF k141_99950 k141_99950_8 8099 8950 - HTH_AraC | HTH_AraC
CAZyme k141_99950 k141_99950_9 9194 10522 + GH27
CAZyme k141_99950 k141_99950_10 10684 12153 + GH4
pfam k141_99950 k141_99950_11 12529 13506 + Transposase_31
CAZyme k141_99950 k141_99950_12 13570 14487 + GH43_22
pfam k141_99950 k141_99950_13 14627 14938 - Thioredoxin | Thioredoxin_2 | TraF | Thioredoxin_9
pfam k141_99950 k141_99950_14 15109 15378 - DUF1905
TC k141_99950 k141_99950_15 15643 17364 + 3.A.1.135.5
Gene ID: k141_99950_7
Type: CAZyme
Location: 5305 - 7704 (-)
Gene ID: k141_99950_8
Type: TF
Location: 8099 - 8950 (-)
Gene ID: k141_99950_9
Type: CAZyme
Location: 9194 - 10522 (+)
Gene ID: k141_99950_10
Type: CAZyme
Location: 10684 - 12153 (+)
Gene ID: k141_99950_11
Type: pfam
Location: 12529 - 13506 (+)
Gene ID: k141_99950_12
Type: CAZyme
Location: 13570 - 14487 (+)
Gene ID: k141_99950_13
Type: pfam
Location: 14627 - 14938 (-)
Gene ID: k141_99950_14
Type: pfam
Location: 15109 - 15378 (-)
Gene ID: k141_99950_15
Type: TC
Location: 15643 - 17364 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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