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Cluster: AG511_67_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_20061 k141_20061_54 58841 60802 - PL27
TF k141_20061 k141_20061_55 61048 61545 - HTH_3
CAZyme k141_20061 k141_20061_56 62148 64613 - GH2
TF k141_20061 k141_20061_57 64932 66011 + HTH_AraC
TC k141_20061 k141_20061_58 66093 67460 - 2.A.2.3.3
CAZyme k141_20061 k141_20061_59 67855 69936 - GH3
TF k141_20061 k141_20061_60 70552 71526 + LacI
TC k141_20061 k141_20061_61 71769 72704 + 3.A.1.1.10
TC k141_20061 k141_20061_62 72722 73654 + 3.A.1.1.10
STP k141_20061 k141_20061_63 73740 75551 + SBP_bac_1
CAZyme k141_20061 k141_20061_64 75626 77029 + GH32
Gene ID: k141_20061_54
Type: CAZyme
Location: 58841 - 60802 (-)
Gene ID: k141_20061_55
Type: TF
Location: 61048 - 61545 (-)
Gene ID: k141_20061_56
Type: CAZyme
Location: 62148 - 64613 (-)
Gene ID: k141_20061_57
Type: TF
Location: 64932 - 66011 (+)
Gene ID: k141_20061_58
Type: TC
Location: 66093 - 67460 (-)
Gene ID: k141_20061_59
Type: CAZyme
Location: 67855 - 69936 (-)
Gene ID: k141_20061_60
Type: TF
Location: 70552 - 71526 (+)
Gene ID: k141_20061_61
Type: TC
Location: 71769 - 72704 (+)
Gene ID: k141_20061_62
Type: TC
Location: 72722 - 73654 (+)
Gene ID: k141_20061_63
Type: STP
Location: 73740 - 75551 (+)
Gene ID: k141_20061_64
Type: CAZyme
Location: 75626 - 77029 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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