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Cluster: AG511_67_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_65890 k141_65890_3 2610 4466 - 3.A.1.135.5
TC k141_65890 k141_65890_4 4466 6190 - 3.A.1.135.5
NULL(UNKNOWN) k141_65890 k141_65890_5 6473 6733 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_65890 k141_65890_6 7171 8511 - GH5_22
CAZyme k141_65890 k141_65890_7 8679 10682 - GH31_4
pfam k141_65890 k141_65890_8 10892 15571 - RNase_T | PHP | DNA_pol3_alpha | DNA_pol3_alpha | DNA_pol3_a_NI | HHH_6 | Rv2179c-like | DNA_pol3_finger
pfam k141_65890 k141_65890_9 15572 16630 - GcpE
TC k141_65890 k141_65890_10 16649 17551 - 3.A.1.12.8
TC k141_65890 k141_65890_11 17567 18292 - 3.A.1.12.4
TC k141_65890 k141_65890_12 18289 18951 - 3.A.1.12.10
CAZyme k141_65890 k141_65890_13 19137 21371 - GH36
Gene ID: k141_65890_3
Type: TC
Location: 2610 - 4466 (-)
Gene ID: k141_65890_4
Type: TC
Location: 4466 - 6190 (-)
Gene ID: k141_65890_5
Type:
Location: 6473 - 6733 (+)
Gene ID: k141_65890_6
Type: CAZyme
Location: 7171 - 8511 (-)
Gene ID: k141_65890_7
Type: CAZyme
Location: 8679 - 10682 (-)
Gene ID: k141_65890_8
Type: pfam
Location: 10892 - 15571 (-)
Gene ID: k141_65890_9
Type: pfam
Location: 15572 - 16630 (-)
Gene ID: k141_65890_10
Type: TC
Location: 16649 - 17551 (-)
Gene ID: k141_65890_11
Type: TC
Location: 17567 - 18292 (-)
Gene ID: k141_65890_12
Type: TC
Location: 18289 - 18951 (-)
Gene ID: k141_65890_13
Type: CAZyme
Location: 19137 - 21371 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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