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Cluster: AG511_67_CGC143

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_26089 k141_26089_2 1376 3151 + 9.B.33.1.1
TF k141_26089 k141_26089_3 3157 4662 + HTH_AraC | HTH_AraC
pfam k141_26089 k141_26089_4 4980 5405 + VanZ
CAZyme k141_26089 k141_26089_5 5445 7820 - GH2
pfam k141_26089 k141_26089_6 8292 11774 + PDDEXK_1 | ADDB_N
pfam k141_26089 k141_26089_7 11734 15396 + UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C
TC k141_26089 k141_26089_8 15569 16123 + 3.A.1.29.1
TC k141_26089 k141_26089_9 16346 18055 + 3.A.1.29.1
TC k141_26089 k141_26089_10 18048 18875 + 3.A.1.29.1
pfam k141_26089 k141_26089_11 18947 19828 + Aldose_epim
TC k141_26089 k141_26089_12 20066 20626 - 2.A.88.3.1
Gene ID: k141_26089_2
Type: TC
Location: 1376 - 3151 (+)
Gene ID: k141_26089_3
Type: TF
Location: 3157 - 4662 (+)
Gene ID: k141_26089_4
Type: pfam
Location: 4980 - 5405 (+)
Gene ID: k141_26089_5
Type: CAZyme
Location: 5445 - 7820 (-)
Gene ID: k141_26089_6
Type: pfam
Location: 8292 - 11774 (+)
Gene ID: k141_26089_7
Type: pfam
Location: 11734 - 15396 (+)
Gene ID: k141_26089_8
Type: TC
Location: 15569 - 16123 (+)
Gene ID: k141_26089_9
Type: TC
Location: 16346 - 18055 (+)
Gene ID: k141_26089_10
Type: TC
Location: 18048 - 18875 (+)
Gene ID: k141_26089_11
Type: pfam
Location: 18947 - 19828 (+)
Gene ID: k141_26089_12
Type: TC
Location: 20066 - 20626 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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