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Cluster: AG511_67_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_131023 k141_131023_13 15189 16919 + 3.A.1.135.9
TC k141_131023 k141_131023_14 16923 18743 + 3.A.1.135.9
pfam k141_131023 k141_131023_15 18886 19554 + ABC_trans_CmpB
TC k141_131023 k141_131023_16 19551 20636 + 2.A.86.1.3
TC k141_131023 k141_131023_17 20671 22005 + 3.A.1.122.2
TF k141_131023 k141_131023_18 22147 23784 - HTH_AraC | HTH_AraC
TC k141_131023 k141_131023_19 23798 25546 - 8.A.59.2.1
TC k141_131023 k141_131023_20 25835 27592 + 3.A.1.1.9
TC k141_131023 k141_131023_21 27704 28624 + 3.A.1.1.9
TC k141_131023 k141_131023_22 28639 29520 + 3.A.1.1.9
pfam k141_131023 k141_131023_23 29591 31036 + Fucose_iso_C | Arabinose_Iso_C | AraA_central
NULL(UNKNOWN) k141_131023 k141_131023_24 31045 33468 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_131023 k141_131023_25 33540 35726 + GH2
pfam k141_131023 k141_131023_26 35731 36411 + Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_131023 k141_131023_27 36431 38497 + GH3
Gene ID: k141_131023_13
Type: TC
Location: 15189 - 16919 (+)
Gene ID: k141_131023_14
Type: TC
Location: 16923 - 18743 (+)
Gene ID: k141_131023_15
Type: pfam
Location: 18886 - 19554 (+)
Gene ID: k141_131023_16
Type: TC
Location: 19551 - 20636 (+)
Gene ID: k141_131023_17
Type: TC
Location: 20671 - 22005 (+)
Gene ID: k141_131023_18
Type: TF
Location: 22147 - 23784 (-)
Gene ID: k141_131023_19
Type: TC
Location: 23798 - 25546 (-)
Gene ID: k141_131023_20
Type: TC
Location: 25835 - 27592 (+)
Gene ID: k141_131023_21
Type: TC
Location: 27704 - 28624 (+)
Gene ID: k141_131023_22
Type: TC
Location: 28639 - 29520 (+)
Gene ID: k141_131023_23
Type: pfam
Location: 29591 - 31036 (+)
Gene ID: k141_131023_24
Type:
Location: 31045 - 33468 (+)
Gene ID: k141_131023_25
Type: CAZyme
Location: 33540 - 35726 (+)
Gene ID: k141_131023_26
Type: pfam
Location: 35731 - 36411 (+)
Gene ID: k141_131023_27
Type: CAZyme
Location: 36431 - 38497 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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