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Cluster: AG511_67_CGC132

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_97693 k141_97693_77 99262 99945 + 2.A.38.1.1
TC k141_97693 k141_97693_78 100031 101551 + 2.A.38.1.4
TF k141_97693 k141_97693_79 101544 102926 - HTH_AraC
TC k141_97693 k141_97693_80 102986 104764 - 8.A.59.2.1
TC k141_97693 k141_97693_81 104993 105934 + 3.A.1.1.10
TC k141_97693 k141_97693_82 105949 106824 + 3.A.1.1.10
pfam k141_97693 k141_97693_83 106857 108497 + SBP_bac_8
CAZyme k141_97693 k141_97693_84 108634 110280 + GH123
pfam k141_97693 k141_97693_85 110473 111171 + RelA_SpoT
TF k141_97693 k141_97693_86 111442 113409 + HTH_AraC | HTH_AraC
TC k141_97693 k141_97693_87 113636 115288 + 3.A.1.1.10
TC k141_97693 k141_97693_88 115437 116366 + 3.A.1.1.10
TC k141_97693 k141_97693_89 116411 117322 + 3.A.1.1.10
Gene ID: k141_97693_77
Type: TC
Location: 99262 - 99945 (+)
Gene ID: k141_97693_78
Type: TC
Location: 100031 - 101551 (+)
Gene ID: k141_97693_79
Type: TF
Location: 101544 - 102926 (-)
Gene ID: k141_97693_80
Type: TC
Location: 102986 - 104764 (-)
Gene ID: k141_97693_81
Type: TC
Location: 104993 - 105934 (+)
Gene ID: k141_97693_82
Type: TC
Location: 105949 - 106824 (+)
Gene ID: k141_97693_83
Type: pfam
Location: 106857 - 108497 (+)
Gene ID: k141_97693_84
Type: CAZyme
Location: 108634 - 110280 (+)
Gene ID: k141_97693_85
Type: pfam
Location: 110473 - 111171 (+)
Gene ID: k141_97693_86
Type: TF
Location: 111442 - 113409 (+)
Gene ID: k141_97693_87
Type: TC
Location: 113636 - 115288 (+)
Gene ID: k141_97693_88
Type: TC
Location: 115437 - 116366 (+)
Gene ID: k141_97693_89
Type: TC
Location: 116411 - 117322 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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