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Cluster: AG511_67_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_131023 k141_131023_3 2244 3818 - GH123
TC k141_131023 k141_131023_4 3831 5681 - 8.A.59.2.1
TF k141_131023 k141_131023_5 5671 6774 - HTH_AraC | HTH_AraC
TC k141_131023 k141_131023_6 6982 7908 + 3.A.1.1.10
TC k141_131023 k141_131023_7 7931 8845 + 3.A.1.1.29
pfam k141_131023 k141_131023_8 8909 10531 + SBP_bac_1 | DUF3502
CAZyme k141_131023 k141_131023_9 10613 12451 + GH129
Gene ID: k141_131023_3
Type: CAZyme
Location: 2244 - 3818 (-)
Gene ID: k141_131023_4
Type: TC
Location: 3831 - 5681 (-)
Gene ID: k141_131023_5
Type: TF
Location: 5671 - 6774 (-)
Gene ID: k141_131023_6
Type: TC
Location: 6982 - 7908 (+)
Gene ID: k141_131023_7
Type: TC
Location: 7931 - 8845 (+)
Gene ID: k141_131023_8
Type: pfam
Location: 8909 - 10531 (+)
Gene ID: k141_131023_9
Type: CAZyme
Location: 10613 - 12451 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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