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Cluster: AG511_67_CGC117

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_77280 k141_77280_23 23313 24269 + 8.A.5.1.4
NULL(UNKNOWN) k141_77280 k141_77280_24 24359 25753 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_77280 k141_77280_25 25790 26977 + 2.A.1.65.8
CAZyme k141_77280 k141_77280_26 26974 28047 + GH172
CAZyme k141_77280 k141_77280_27 28060 30633 + GH116
pfam k141_77280 k141_77280_28 30630 31649 - GFO_IDH_MocA | CoA_binding | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme k141_77280 k141_77280_29 31713 32672 - GH43_31
CAZyme k141_77280 k141_77280_30 32902 34839 + GH146
pfam k141_77280 k141_77280_31 34911 36188 + CoiA_nuc
TF k141_77280 k141_77280_32 36349 37386 + LacI
CAZyme k141_77280 k141_77280_33 37659 39290 + GH13_31
Gene ID: k141_77280_23
Type: TC
Location: 23313 - 24269 (+)
Gene ID: k141_77280_24
Type:
Location: 24359 - 25753 (+)
Gene ID: k141_77280_25
Type: TC
Location: 25790 - 26977 (+)
Gene ID: k141_77280_26
Type: CAZyme
Location: 26974 - 28047 (+)
Gene ID: k141_77280_27
Type: CAZyme
Location: 28060 - 30633 (+)
Gene ID: k141_77280_28
Type: pfam
Location: 30630 - 31649 (-)
Gene ID: k141_77280_29
Type: CAZyme
Location: 31713 - 32672 (-)
Gene ID: k141_77280_30
Type: CAZyme
Location: 32902 - 34839 (+)
Gene ID: k141_77280_31
Type: pfam
Location: 34911 - 36188 (+)
Gene ID: k141_77280_32
Type: TF
Location: 36349 - 37386 (+)
Gene ID: k141_77280_33
Type: CAZyme
Location: 37659 - 39290 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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