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Cluster: AG511_67_CGC113

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_77064 k141_77064_42 58876 60699 + 8.A.59.2.1
TF k141_77064 k141_77064_43 60696 61472 + HTH_AraC | HTH_AraC
TC k141_77064 k141_77064_44 61596 63245 + 3.A.1.1.9
TC k141_77064 k141_77064_45 63343 64257 + 3.A.1.1.10
TC k141_77064 k141_77064_46 64270 65169 + 3.A.1.1.10
CAZyme k141_77064 k141_77064_47 65186 68836 + GH115
pfam k141_77064 k141_77064_48 69078 69761 + Ubie_methyltran | MTS | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam k141_77064 k141_77064_49 69934 71541 - DUF3502
TC k141_77064 k141_77064_50 71581 72486 - 3.A.1.1.29
TC k141_77064 k141_77064_51 72499 73422 - 3.A.1.1.10
TF k141_77064 k141_77064_52 73597 74697 + HTH_AraC | HTH_AraC
TC k141_77064 k141_77064_53 74684 76492 + 8.A.59.2.1
Gene ID: k141_77064_42
Type: TC
Location: 58876 - 60699 (+)
Gene ID: k141_77064_43
Type: TF
Location: 60696 - 61472 (+)
Gene ID: k141_77064_44
Type: TC
Location: 61596 - 63245 (+)
Gene ID: k141_77064_45
Type: TC
Location: 63343 - 64257 (+)
Gene ID: k141_77064_46
Type: TC
Location: 64270 - 65169 (+)
Gene ID: k141_77064_47
Type: CAZyme
Location: 65186 - 68836 (+)
Gene ID: k141_77064_48
Type: pfam
Location: 69078 - 69761 (+)
Gene ID: k141_77064_49
Type: pfam
Location: 69934 - 71541 (-)
Gene ID: k141_77064_50
Type: TC
Location: 71581 - 72486 (-)
Gene ID: k141_77064_51
Type: TC
Location: 72499 - 73422 (-)
Gene ID: k141_77064_52
Type: TF
Location: 73597 - 74697 (+)
Gene ID: k141_77064_53
Type: TC
Location: 74684 - 76492 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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