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Cluster: AG511_3_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_157676 k141_157676_41 39609 42140 - GT30
TC k141_157676 k141_157676_42 42195 43979 - 3.A.1.106.3
CAZyme k141_157676 k141_157676_43 43976 45112 - GT19
pfam k141_157676 k141_157676_44 45238 46059 - LpxI_C | LpxI_N
pfam k141_157676 k141_157676_45 46064 46873 - Hexapep | Hexapep | Acetyltransf_11
CAZyme k141_157676 k141_157676_46 46889 48226 - CE11
Gene ID: k141_157676_41
Type: CAZyme
Location: 39609 - 42140 (-)
Gene ID: k141_157676_42
Type: TC
Location: 42195 - 43979 (-)
Gene ID: k141_157676_43
Type: CAZyme
Location: 43976 - 45112 (-)
Gene ID: k141_157676_44
Type: pfam
Location: 45238 - 46059 (-)
Gene ID: k141_157676_45
Type: pfam
Location: 46064 - 46873 (-)
Gene ID: k141_157676_46
Type: CAZyme
Location: 46889 - 48226 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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