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Cluster: AG508_10_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_77131 k141_77131_59 72509 77263 + CBM67
STP k141_77131 k141_77131_60 77368 78774 + SBP_bac_1
pfam k141_77131 k141_77131_61 78894 79820 + BPD_transp_1
TC k141_77131 k141_77131_62 79817 80701 + 3.A.1.1.18
CAZyme k141_77131 k141_77131_63 80705 83191 + GH106
CAZyme k141_77131 k141_77131_64 83184 84443 + GH109
NULL(UNKNOWN) k141_77131 k141_77131_65 84440 86398 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_77131 k141_77131_66 86440 87666 + GH37
CAZyme k141_77131 k141_77131_67 87688 89973 + GH94
CAZyme k141_77131 k141_77131_68 90048 91301 + GH109
Gene ID: k141_77131_59
Type: CAZyme
Location: 72509 - 77263 (+)
Gene ID: k141_77131_60
Type: STP
Location: 77368 - 78774 (+)
Gene ID: k141_77131_61
Type: pfam
Location: 78894 - 79820 (+)
Gene ID: k141_77131_62
Type: TC
Location: 79817 - 80701 (+)
Gene ID: k141_77131_63
Type: CAZyme
Location: 80705 - 83191 (+)
Gene ID: k141_77131_64
Type: CAZyme
Location: 83184 - 84443 (+)
Gene ID: k141_77131_65
Type:
Location: 84440 - 86398 (+)
Gene ID: k141_77131_66
Type: CAZyme
Location: 86440 - 87666 (+)
Gene ID: k141_77131_67
Type: CAZyme
Location: 87688 - 89973 (+)
Gene ID: k141_77131_68
Type: CAZyme
Location: 90048 - 91301 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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