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Cluster: AG508_10_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_24208 k141_24208_20 29586 31178 + GH20
pfam k141_24208 k141_24208_21 31264 32163 + IU_nuc_hydro
CAZyme k141_24208 k141_24208_22 32165 33832 + GH78
pfam k141_24208 k141_24208_23 33941 35401 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC k141_24208 k141_24208_24 35398 36381 + 9.B.146.1.3
pfam k141_24208 k141_24208_25 36390 37730 + Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC k141_24208 k141_24208_26 37727 38848 + 2.A.103.1.3
Gene ID: k141_24208_20
Type: CAZyme
Location: 29586 - 31178 (+)
Gene ID: k141_24208_21
Type: pfam
Location: 31264 - 32163 (+)
Gene ID: k141_24208_22
Type: CAZyme
Location: 32165 - 33832 (+)
Gene ID: k141_24208_23
Type: pfam
Location: 33941 - 35401 (+)
Gene ID: k141_24208_24
Type: TC
Location: 35398 - 36381 (+)
Gene ID: k141_24208_25
Type: pfam
Location: 36390 - 37730 (+)
Gene ID: k141_24208_26
Type: TC
Location: 37727 - 38848 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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