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Cluster: AG508_10_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_28988 k141_28988_9 9067 11379 + CBM67 | GH78
NULL(UNKNOWN) k141_28988 k141_28988_10 11391 13070 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_28988 k141_28988_11 13098 14024 + BPD_transp_1
TC k141_28988 k141_28988_12 14027 14905 + 3.A.1.1.41
NULL(UNKNOWN) k141_28988 k141_28988_13 14996 18121 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_28988 k141_28988_14 18125 20110 + GH163
pfam k141_28988 k141_28988_15 20086 23118 + Big_2
pfam k141_28988 k141_28988_16 23232 24392 + FAD_binding_2 | GIDA | DAO | FAD_oxidored | FAD_oxidored | NAD_binding_8
CAZyme k141_28988 k141_28988_17 24442 26658 + GH78
Gene ID: k141_28988_9
Type: CAZyme
Location: 9067 - 11379 (+)
Gene ID: k141_28988_10
Type:
Location: 11391 - 13070 (+)
Gene ID: k141_28988_11
Type: pfam
Location: 13098 - 14024 (+)
Gene ID: k141_28988_12
Type: TC
Location: 14027 - 14905 (+)
Gene ID: k141_28988_13
Type:
Location: 14996 - 18121 (+)
Gene ID: k141_28988_14
Type: CAZyme
Location: 18125 - 20110 (+)
Gene ID: k141_28988_15
Type: pfam
Location: 20086 - 23118 (+)
Gene ID: k141_28988_16
Type: pfam
Location: 23232 - 24392 (+)
Gene ID: k141_28988_17
Type: CAZyme
Location: 24442 - 26658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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