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Cluster: AG505_maxbin.010_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_220191 k141_220191_12 11902 13563 + 2.A.81.1.5
TF k141_220191 k141_220191_13 13531 14277 - GntR
TC k141_220191 k141_220191_14 14501 16123 + 4.A.1.1.10
CAZyme k141_220191 k141_220191_15 16120 17442 + GH4
TC k141_220191 k141_220191_16 17535 17882 + 9.B.51.1.1
pfam k141_220191 k141_220191_17 17872 18219 + DUF202
STP k141_220191 k141_220191_18 18265 19545 - PALP
TC k141_220191 k141_220191_19 19563 20900 - 2.A.8.1.5
TF k141_220191 k141_220191_20 21099 22031 + HTH_1
CAZyme k141_220191 k141_220191_21 22118 23206 + GH5
TC k141_220191 k141_220191_22 23109 24293 - 2.A.1.2.9
TC k141_220191 k141_220191_23 24469 25302 - 2.A.7.31.3
Gene ID: k141_220191_12
Type: TC
Location: 11902 - 13563 (+)
Gene ID: k141_220191_13
Type: TF
Location: 13531 - 14277 (-)
Gene ID: k141_220191_14
Type: TC
Location: 14501 - 16123 (+)
Gene ID: k141_220191_15
Type: CAZyme
Location: 16120 - 17442 (+)
Gene ID: k141_220191_16
Type: TC
Location: 17535 - 17882 (+)
Gene ID: k141_220191_17
Type: pfam
Location: 17872 - 18219 (+)
Gene ID: k141_220191_18
Type: STP
Location: 18265 - 19545 (-)
Gene ID: k141_220191_19
Type: TC
Location: 19563 - 20900 (-)
Gene ID: k141_220191_20
Type: TF
Location: 21099 - 22031 (+)
Gene ID: k141_220191_21
Type: CAZyme
Location: 22118 - 23206 (+)
Gene ID: k141_220191_22
Type: TC
Location: 23109 - 24293 (-)
Gene ID: k141_220191_23
Type: TC
Location: 24469 - 25302 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_220191_17 vegetarian > omnivore 1.80592 0.04059
k141_220191_18 vegetarian > omnivore 1.39570 0.01548
k141_220191_23 vegetarian > omnivore 1.17305 0.04711

🧭 Explore Read Mapping of CGC

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