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Cluster: AG505_maxbin.010_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_96470 k141_96470_24 18884 20008 - 3.A.9.1.1
TF k141_96470 k141_96470_25 20342 20815 - MarR
TC k141_96470 k141_96470_26 21081 22469 + 2.A.1.14.9
TF k141_96470 k141_96470_27 22518 23498 + HTH_AraC
pfam k141_96470 k141_96470_28 23577 24587 + Gp_dh_N | Gp_dh_C
TC k141_96470 k141_96470_29 24698 25885 - 2.A.1.2.26
TF k141_96470 k141_96470_30 26002 26958 + HTH_AraC
TC k141_96470 k141_96470_31 26972 28354 - 1.B.15.1.1
TC k141_96470 k141_96470_32 28452 29810 - 2.A.2.3.4
CAZyme k141_96470 k141_96470_33 30167 31852 + GH37
TC k141_96470 k141_96470_34 32266 34368 - 1.B.14.1.2
TC k141_96470 k141_96470_35 34482 34736 - 1.E.43.1.1
pfam k141_96470 k141_96470_36 34944 35675 + PilZ | PilZN
CAZyme k141_96470 k141_96470_37 35713 36324 - GH23
peptidase k141_96470 k141_96470_38 36433 37347 + S66.002
TC k141_96470 k141_96470_39 37445 39178 + 2.A.36.6.11
Gene ID: k141_96470_24
Type: TC
Location: 18884 - 20008 (-)
Gene ID: k141_96470_25
Type: TF
Location: 20342 - 20815 (-)
Gene ID: k141_96470_26
Type: TC
Location: 21081 - 22469 (+)
Gene ID: k141_96470_27
Type: TF
Location: 22518 - 23498 (+)
Gene ID: k141_96470_28
Type: pfam
Location: 23577 - 24587 (+)
Gene ID: k141_96470_29
Type: TC
Location: 24698 - 25885 (-)
Gene ID: k141_96470_30
Type: TF
Location: 26002 - 26958 (+)
Gene ID: k141_96470_31
Type: TC
Location: 26972 - 28354 (-)
Gene ID: k141_96470_32
Type: TC
Location: 28452 - 29810 (-)
Gene ID: k141_96470_33
Type: CAZyme
Location: 30167 - 31852 (+)
Gene ID: k141_96470_34
Type: TC
Location: 32266 - 34368 (-)
Gene ID: k141_96470_35
Type: TC
Location: 34482 - 34736 (-)
Gene ID: k141_96470_36
Type: pfam
Location: 34944 - 35675 (+)
Gene ID: k141_96470_37
Type: CAZyme
Location: 35713 - 36324 (-)
Gene ID: k141_96470_38
Type: peptidase
Location: 36433 - 37347 (+)
Gene ID: k141_96470_39
Type: TC
Location: 37445 - 39178 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_96470_27 vegetarian > vegan 1.01946 0.04104
k141_96470_28 vegetarian > omnivore 1.78080 0.04711
k141_96470_36 vegetarian > omnivore 5.82212 0.03364
k141_96470_36 vegetarian > vegan 1.75389 0.04104
k141_96470_37 vegetarian > omnivore 1.03942 0.04711

🧭 Explore Read Mapping of CGC

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