Cluster: AG501_bin.49_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: AG501_bin.49
- CGC Family ID: CGCFAM_00024
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_205092 | k141_205092_2 | 114 | 1490 | - | GH13_20 |
| TC | k141_205092 | k141_205092_3 | 1644 | 2840 | - | 2.A.1.2.18 |
| pfam | k141_205092 | k141_205092_4 | 2944 | 3426 | - | tRNA_edit |
| TC | k141_205092 | k141_205092_5 | 3521 | 5878 | - | 9.A.8.1.6 |
| pfam | k141_205092 | k141_205092_6 | 6242 | 7468 | + | Zn_Ribbon_1 |
| peptidase | k141_205092 | k141_205092_7 | 7705 | 8487 | - | S09.UPW |
| TC | k141_205092 | k141_205092_8 | 8851 | 9414 | + | 4.A.1.2.6 |
| TC | k141_205092 | k141_205092_9 | 9650 | 11584 | + | 9.B.97.5.1 |
| pfam | k141_205092 | k141_205092_10 | 11721 | 13124 | + | tRNA-synt_2 | tRNA_anti-codon |
| pfam | k141_205092 | k141_205092_11 | 13382 | 14170 | + | WYL |
| TC | k141_205092 | k141_205092_12 | 14328 | 15308 | + | 3.A.1.34.1 |
| TC | k141_205092 | k141_205092_13 | 15513 | 16436 | + | 3.A.1.34.1 |
| TC | k141_205092 | k141_205092_14 | 16429 | 17223 | + | 3.A.1.34.1 |
| TC | k141_205092 | k141_205092_15 | 17371 | 18138 | + | 1.A.23.4.2 |
| pfam | k141_205092 | k141_205092_16 | 18233 | 20149 | + | Bmp |
| pfam | k141_205092 | k141_205092_17 | 20146 | 20856 | + | Metallophos | Metallophos_2 |
| TC | k141_205092 | k141_205092_18 | 20982 | 21689 | - | 1.C.82.1.1 |
Gene ID: k141_205092_2
Type: CAZyme
Location: 114 - 1490 (-)
Type: CAZyme
Location: 114 - 1490 (-)
Gene ID: k141_205092_3
Type: TC
Location: 1644 - 2840 (-)
Type: TC
Location: 1644 - 2840 (-)
Gene ID: k141_205092_4
Type: pfam
Location: 2944 - 3426 (-)
Type: pfam
Location: 2944 - 3426 (-)
Gene ID: k141_205092_5
Type: TC
Location: 3521 - 5878 (-)
Type: TC
Location: 3521 - 5878 (-)
Gene ID: k141_205092_6
Type: pfam
Location: 6242 - 7468 (+)
Type: pfam
Location: 6242 - 7468 (+)
Gene ID: k141_205092_7
Type: peptidase
Location: 7705 - 8487 (-)
Type: peptidase
Location: 7705 - 8487 (-)
Gene ID: k141_205092_8
Type: TC
Location: 8851 - 9414 (+)
Type: TC
Location: 8851 - 9414 (+)
Gene ID: k141_205092_9
Type: TC
Location: 9650 - 11584 (+)
Type: TC
Location: 9650 - 11584 (+)
Gene ID: k141_205092_10
Type: pfam
Location: 11721 - 13124 (+)
Type: pfam
Location: 11721 - 13124 (+)
Gene ID: k141_205092_11
Type: pfam
Location: 13382 - 14170 (+)
Type: pfam
Location: 13382 - 14170 (+)
Gene ID: k141_205092_12
Type: TC
Location: 14328 - 15308 (+)
Type: TC
Location: 14328 - 15308 (+)
Gene ID: k141_205092_13
Type: TC
Location: 15513 - 16436 (+)
Type: TC
Location: 15513 - 16436 (+)
Gene ID: k141_205092_14
Type: TC
Location: 16429 - 17223 (+)
Type: TC
Location: 16429 - 17223 (+)
Gene ID: k141_205092_15
Type: TC
Location: 17371 - 18138 (+)
Type: TC
Location: 17371 - 18138 (+)
Gene ID: k141_205092_16
Type: pfam
Location: 18233 - 20149 (+)
Type: pfam
Location: 18233 - 20149 (+)
Gene ID: k141_205092_17
Type: pfam
Location: 20146 - 20856 (+)
Type: pfam
Location: 20146 - 20856 (+)
Gene ID: k141_205092_18
Type: TC
Location: 20982 - 21689 (-)
Type: TC
Location: 20982 - 21689 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_205092_6 | vegetarian > vegan | 16.18872 | 0.00863 |
| k141_205092_9 | vegan > omnivore | 1.45948 | 0.01415 |
| k141_205092_9 | vegetarian > omnivore | 1.49862 | 0.01867 |